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2QQO

Crystal Structure of the a2b1b2 Domains from Human Neuropilin-2

Functional Information from GO Data
ChainGOidnamespacecontents
A0001525biological_processangiogenesis
A0005021molecular_functionvascular endothelial growth factor receptor activity
A0007411biological_processaxon guidance
A0017154molecular_functionsemaphorin receptor activity
A0038084biological_processvascular endothelial growth factor signaling pathway
B0001525biological_processangiogenesis
B0005021molecular_functionvascular endothelial growth factor receptor activity
B0007411biological_processaxon guidance
B0017154molecular_functionsemaphorin receptor activity
B0038084biological_processvascular endothelial growth factor signaling pathway
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA A 1
ChainResidue
AGLU197
AASP211
AASP252
AALA254
AVAL255
AHOH757
BLYS326

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CA B 1
ChainResidue
BASP211
BASP252
BALA254
BVAL255
BHOH760
ALYS326
BGLU197

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 602
ChainResidue
BLYS547
BPHE549
BGLU550
BARG562
BHOH609
BHOH781

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 2
ChainResidue
AMET338
AARG428
AVAL429
AALA432
AARG562

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 3
ChainResidue
AARG350
AGLU351
BHIS381
BLYS382
BVAL383

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 4
ChainResidue
BTYR528
BLEU530
BASP534
BGLU536
BPRO567

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 5
ChainResidue
BARG471
BSER472

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 6
ChainResidue
BASP217
BTHR242
BLEU336
BHOH625
BHOH659

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE TRS A 602
ChainResidue
ATRP304
ATHR319
ATYR356
AILE418

Functional Information from PROSITE/UniProt
site_idPS01285
Number of Residues30
DetailsFA58C_1 Coagulation factors 5/8 type C domain (FA58C) signature 1. GWtpnldsnke......YLqVDlrfltmLtaIaTQG
ChainResidueDetails
AGLY317-GLY346
AGLY473-GLY505

site_idPS01286
Number of Residues17
DetailsFA58C_2 Coagulation factors 5/8 type C domain (FA58C) signature 2. Pqtwhsgia..LRlELfGC
ChainResidueDetails
APRO411-CYS427
APRO575-CYS592

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues300
DetailsDomain: {"description":"F5/8 type C 1","evidences":[{"source":"PROSITE-ProRule","id":"PRU00081","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues38
DetailsRegion: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues24
DetailsCompositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17989695","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2QQO","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"17989695","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2QQK","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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