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2QNC

Crystal structure of T4 Endonuclease VII N62D mutant in complex with a DNA Holliday junction

Functional Information from GO Data
ChainGOidnamespacecontents
A0004519molecular_functionendonuclease activity
A0046872molecular_functionmetal ion binding
B0004519molecular_functionendonuclease activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 158
ChainResidue
ACYS23
ACYS26
ACYS58
ACYS61

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 159
ChainResidue
DDT13
AASP40
AASP62
AGLU65
AHOH160
DDC12

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 158
ChainResidue
BCYS23
BCYS26
BCYS58
BCYS61

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG F 24
ChainResidue
BASP40
BHIS41
BARG54
BASP62
BHOH161
FDC12
FDC13

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE EDO B 159
ChainResidue
BGLY79

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING:
ChainResidueDetails
ACYS23
BCYS58
BCYS61
BASP62
ACYS26
AASP40
ACYS58
ACYS61
AASP62
BCYS23
BCYS26
BASP40

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1e7l
ChainResidueDetails
AHIS43
AGLU65
AHIS41

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1e7l
ChainResidueDetails
BHIS43
BGLU65
BHIS41

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1e7l
ChainResidueDetails
AHIS105

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1e7l
ChainResidueDetails
BHIS105

site_idMCSA1
Number of Residues6
DetailsM-CSA 161
ChainResidueDetails
AASP40metal ligand
AHIS41hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS43electrostatic stabiliser, hydrogen bond donor
AASP62metal ligand
AGLU65electrostatic stabiliser, hydrogen bond donor
AHIS105hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

site_idMCSA2
Number of Residues6
DetailsM-CSA 161
ChainResidueDetails
BASP40metal ligand
BHIS41hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS43electrostatic stabiliser, hydrogen bond donor
BASP62metal ligand
BGLU65electrostatic stabiliser, hydrogen bond donor
BHIS105hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor

226707

PDB entries from 2024-10-30

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