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2QD7

HIV-1 Protease Mutant V82A with potent Antiviral inhibitor GRL-98065

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 701
ChainResidue
ALYS14
AILE15
AGLY16
AGLY17
AHOH904
AHOH905
AHOH934
BLYS114
BGLY117

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 B 703
ChainResidue
AHOH972
BPRO101
BARG157
BHIS169
BHOH824
BHOH883

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR RESIDUE 065 B 404
ChainResidue
AASP25
AGLY27
AALA28
AASP30
AGLY48
AGLY49
AILE84
BASP125
BGLY127
BALA128
BASP129
BASP130
BILE147
BGLY148
BGLY149
BILE150
BHOH803

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 901
ChainResidue
APRO1
ALYS55
BHIS169
BLYS170
BHOH859

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 902
ChainResidue
APRO39
AGLY40
AHOH962
AHOH1001
BSER137

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 801
ChainResidue
BLEU110
BTHR112
BARG141
BTRP142
BHOH802
BHOH823

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 802
ChainResidue
ATHR4
ALEU5
ATRP6
AHOH903
BTHR191
BALA195
BTHR196

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ALLDTGADDTVI
ChainResidueDetails
AALA22-ILE33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues138
DetailsDomain: {"description":"Peptidase A2","evidences":[{"source":"PROSITE-ProRule","id":"PRU00275","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues20
DetailsRegion: {"description":"Dimerization of protease","evidences":[{"source":"UniProtKB","id":"P04585","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsActive site: {"description":"For protease activity; shared with dimeric partner","evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BTHR126
BASP125

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
BASP125

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PDB entries from 2025-12-17

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