Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004853 | molecular_function | uroporphyrinogen decarboxylase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005654 | cellular_component | nucleoplasm |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006778 | biological_process | porphyrin-containing compound metabolic process |
A | 0006779 | biological_process | porphyrin-containing compound biosynthetic process |
A | 0006782 | biological_process | protoporphyrinogen IX biosynthetic process |
A | 0006783 | biological_process | heme biosynthetic process |
A | 0006784 | biological_process | heme A biosynthetic process |
A | 0006785 | biological_process | heme B biosynthetic process |
A | 0006787 | biological_process | porphyrin-containing compound catabolic process |
A | 0016831 | molecular_function | carboxy-lyase activity |
A | 0042168 | biological_process | heme metabolic process |
A | 0048034 | biological_process | heme O biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE CP3 A 867 |
Chain | Residue |
A | ARG37 |
A | PHE84 |
A | SER85 |
A | ASP86 |
A | ILE87 |
A | MET100 |
A | PRO106 |
A | PHE154 |
A | TYR164 |
A | PHE217 |
A | SER219 |
A | GLN38 |
A | HIS339 |
A | HOH1143 |
A | HOH1306 |
A | HOH1326 |
A | HOH1328 |
A | HOH1350 |
A | HOH1374 |
A | ALA39 |
A | GLY40 |
A | ARG41 |
A | PHE46 |
A | PHE55 |
A | ILE82 |
A | ILE83 |
Functional Information from PROSITE/UniProt
site_id | PS00906 |
Number of Residues | 10 |
Details | UROD_1 Uroporphyrinogen decarboxylase signature 1. PVWCMRQAGR |
Chain | Residue | Details |
A | PRO32-ARG41 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 7 |
Details | BINDING: |
Chain | Residue | Details |
A | ARG37 | |
A | PHE55 | |
A | SER85 | |
A | ASP86 | |
A | TYR164 | |
A | SER219 | |
A | HIS339 | |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | SITE: Transition state stabilizer |
Chain | Residue | Details |
A | ASP86 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1uro |
Chain | Residue | Details |
A | TYR164 | |
A | ASP86 | |
site_id | MCSA1 |
Number of Residues | 5 |
Details | M-CSA 914 |
Chain | Residue | Details |
A | ARG37 | proton shuttle (general acid/base) |
A | ARG41 | electrostatic stabiliser |
A | ARG50 | proton shuttle (general acid/base) |
A | ASP86 | enhance reactivity, modifies pKa, transition state stabiliser |
A | TYR164 | electrostatic stabiliser |