Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2Q3E

Structure of human UDP-glucose dehydrogenase complexed with NADH and UDP-glucose

Functional Information from GO Data
ChainGOidnamespacecontents
A0001702biological_processgastrulation with mouth forming second
A0003979molecular_functionUDP-glucose 6-dehydrogenase activity
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005829cellular_componentcytosol
A0006024biological_processglycosaminoglycan biosynthetic process
A0006065biological_processUDP-glucuronate biosynthetic process
A0015012biological_processheparan sulfate proteoglycan biosynthetic process
A0016491molecular_functionoxidoreductase activity
A0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
A0030206biological_processchondroitin sulfate biosynthetic process
A0034214biological_processprotein hexamerization
A0042802molecular_functionidentical protein binding
A0048666biological_processneuron development
A0051287molecular_functionNAD binding
A0070062cellular_componentextracellular exosome
B0001702biological_processgastrulation with mouth forming second
B0003979molecular_functionUDP-glucose 6-dehydrogenase activity
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005829cellular_componentcytosol
B0006024biological_processglycosaminoglycan biosynthetic process
B0006065biological_processUDP-glucuronate biosynthetic process
B0015012biological_processheparan sulfate proteoglycan biosynthetic process
B0016491molecular_functionoxidoreductase activity
B0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
B0030206biological_processchondroitin sulfate biosynthetic process
B0034214biological_processprotein hexamerization
B0042802molecular_functionidentical protein binding
B0048666biological_processneuron development
B0051287molecular_functionNAD binding
B0070062cellular_componentextracellular exosome
C0001702biological_processgastrulation with mouth forming second
C0003979molecular_functionUDP-glucose 6-dehydrogenase activity
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005829cellular_componentcytosol
C0006024biological_processglycosaminoglycan biosynthetic process
C0006065biological_processUDP-glucuronate biosynthetic process
C0015012biological_processheparan sulfate proteoglycan biosynthetic process
C0016491molecular_functionoxidoreductase activity
C0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
C0030206biological_processchondroitin sulfate biosynthetic process
C0034214biological_processprotein hexamerization
C0042802molecular_functionidentical protein binding
C0048666biological_processneuron development
C0051287molecular_functionNAD binding
C0070062cellular_componentextracellular exosome
D0001702biological_processgastrulation with mouth forming second
D0003979molecular_functionUDP-glucose 6-dehydrogenase activity
D0005634cellular_componentnucleus
D0005654cellular_componentnucleoplasm
D0005829cellular_componentcytosol
D0006024biological_processglycosaminoglycan biosynthetic process
D0006065biological_processUDP-glucuronate biosynthetic process
D0015012biological_processheparan sulfate proteoglycan biosynthetic process
D0016491molecular_functionoxidoreductase activity
D0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
D0030206biological_processchondroitin sulfate biosynthetic process
D0034214biological_processprotein hexamerization
D0042802molecular_functionidentical protein binding
D0048666biological_processneuron development
D0051287molecular_functionNAD binding
D0070062cellular_componentextracellular exosome
E0001702biological_processgastrulation with mouth forming second
E0003979molecular_functionUDP-glucose 6-dehydrogenase activity
E0005634cellular_componentnucleus
E0005654cellular_componentnucleoplasm
E0005829cellular_componentcytosol
E0006024biological_processglycosaminoglycan biosynthetic process
E0006065biological_processUDP-glucuronate biosynthetic process
E0015012biological_processheparan sulfate proteoglycan biosynthetic process
E0016491molecular_functionoxidoreductase activity
E0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
E0030206biological_processchondroitin sulfate biosynthetic process
E0034214biological_processprotein hexamerization
E0042802molecular_functionidentical protein binding
E0048666biological_processneuron development
E0051287molecular_functionNAD binding
E0070062cellular_componentextracellular exosome
F0001702biological_processgastrulation with mouth forming second
F0003979molecular_functionUDP-glucose 6-dehydrogenase activity
F0005634cellular_componentnucleus
F0005654cellular_componentnucleoplasm
F0005829cellular_componentcytosol
F0006024biological_processglycosaminoglycan biosynthetic process
F0006065biological_processUDP-glucuronate biosynthetic process
F0015012biological_processheparan sulfate proteoglycan biosynthetic process
F0016491molecular_functionoxidoreductase activity
F0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
F0030206biological_processchondroitin sulfate biosynthetic process
F0034214biological_processprotein hexamerization
F0042802molecular_functionidentical protein binding
F0048666biological_processneuron development
F0051287molecular_functionNAD binding
F0070062cellular_componentextracellular exosome
G0001702biological_processgastrulation with mouth forming second
G0003979molecular_functionUDP-glucose 6-dehydrogenase activity
G0005634cellular_componentnucleus
G0005654cellular_componentnucleoplasm
G0005829cellular_componentcytosol
G0006024biological_processglycosaminoglycan biosynthetic process
G0006065biological_processUDP-glucuronate biosynthetic process
G0015012biological_processheparan sulfate proteoglycan biosynthetic process
G0016491molecular_functionoxidoreductase activity
G0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
G0030206biological_processchondroitin sulfate biosynthetic process
G0034214biological_processprotein hexamerization
G0042802molecular_functionidentical protein binding
G0048666biological_processneuron development
G0051287molecular_functionNAD binding
G0070062cellular_componentextracellular exosome
H0001702biological_processgastrulation with mouth forming second
H0003979molecular_functionUDP-glucose 6-dehydrogenase activity
H0005634cellular_componentnucleus
H0005654cellular_componentnucleoplasm
H0005829cellular_componentcytosol
H0006024biological_processglycosaminoglycan biosynthetic process
H0006065biological_processUDP-glucuronate biosynthetic process
H0015012biological_processheparan sulfate proteoglycan biosynthetic process
H0016491molecular_functionoxidoreductase activity
H0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
H0030206biological_processchondroitin sulfate biosynthetic process
H0034214biological_processprotein hexamerization
H0042802molecular_functionidentical protein binding
H0048666biological_processneuron development
H0051287molecular_functionNAD binding
H0070062cellular_componentextracellular exosome
I0001702biological_processgastrulation with mouth forming second
I0003979molecular_functionUDP-glucose 6-dehydrogenase activity
I0005634cellular_componentnucleus
I0005654cellular_componentnucleoplasm
I0005829cellular_componentcytosol
I0006024biological_processglycosaminoglycan biosynthetic process
I0006065biological_processUDP-glucuronate biosynthetic process
I0015012biological_processheparan sulfate proteoglycan biosynthetic process
I0016491molecular_functionoxidoreductase activity
I0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
I0030206biological_processchondroitin sulfate biosynthetic process
I0034214biological_processprotein hexamerization
I0042802molecular_functionidentical protein binding
I0048666biological_processneuron development
I0051287molecular_functionNAD binding
I0070062cellular_componentextracellular exosome
J0001702biological_processgastrulation with mouth forming second
J0003979molecular_functionUDP-glucose 6-dehydrogenase activity
J0005634cellular_componentnucleus
J0005654cellular_componentnucleoplasm
J0005829cellular_componentcytosol
J0006024biological_processglycosaminoglycan biosynthetic process
J0006065biological_processUDP-glucuronate biosynthetic process
J0015012biological_processheparan sulfate proteoglycan biosynthetic process
J0016491molecular_functionoxidoreductase activity
J0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
J0030206biological_processchondroitin sulfate biosynthetic process
J0034214biological_processprotein hexamerization
J0042802molecular_functionidentical protein binding
J0048666biological_processneuron development
J0051287molecular_functionNAD binding
J0070062cellular_componentextracellular exosome
K0001702biological_processgastrulation with mouth forming second
K0003979molecular_functionUDP-glucose 6-dehydrogenase activity
K0005634cellular_componentnucleus
K0005654cellular_componentnucleoplasm
K0005829cellular_componentcytosol
K0006024biological_processglycosaminoglycan biosynthetic process
K0006065biological_processUDP-glucuronate biosynthetic process
K0015012biological_processheparan sulfate proteoglycan biosynthetic process
K0016491molecular_functionoxidoreductase activity
K0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
K0030206biological_processchondroitin sulfate biosynthetic process
K0034214biological_processprotein hexamerization
K0042802molecular_functionidentical protein binding
K0048666biological_processneuron development
K0051287molecular_functionNAD binding
K0070062cellular_componentextracellular exosome
L0001702biological_processgastrulation with mouth forming second
L0003979molecular_functionUDP-glucose 6-dehydrogenase activity
L0005634cellular_componentnucleus
L0005654cellular_componentnucleoplasm
L0005829cellular_componentcytosol
L0006024biological_processglycosaminoglycan biosynthetic process
L0006065biological_processUDP-glucuronate biosynthetic process
L0015012biological_processheparan sulfate proteoglycan biosynthetic process
L0016491molecular_functionoxidoreductase activity
L0016616molecular_functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
L0030206biological_processchondroitin sulfate biosynthetic process
L0034214biological_processprotein hexamerization
L0042802molecular_functionidentical protein binding
L0048666biological_processneuron development
L0051287molecular_functionNAD binding
L0070062cellular_componentextracellular exosome
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 3001
ChainResidue
AMET419

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL G 3002
ChainResidue
GMET419

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL I 3003
ChainResidue
IMET419

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL F 3004
ChainResidue
FMET419

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL C 3005
ChainResidue
CMET419

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL D 3006
ChainResidue
DMET419

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL L 3007
ChainResidue
LMET419

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL K 3008
ChainResidue
KMET419

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 3009
ChainResidue
BMET419

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL H 3010
ChainResidue
HMET419

site_idBC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL E 3011
ChainResidue
EMET419

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL J 3012
ChainResidue
JMET419

site_idBC4
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAI A 500
ChainResidue
AILE10
AGLY11
AGLY13
ATYR14
AVAL15
AASP36
AVAL37
AARG41
ASER88
AVAL89
AASN90
ATHR91
ATYR108
ASER130
ATHR131
AGLU161
ALEU163
AGLU165
ACYS276
ALYS279
AARG346
AUPG501
AHOH3010
AHOH3020
AHOH3024
AHOH3033
AHOH3042
AHOH3045
AHOH3130
AHOH3136
AHOH3161

site_idBC5
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG A 501
ChainResidue
AGLU161
APHE162
ALEU163
AALA164
AGLU165
ALYS220
AASN224
AILE231
APHE265
ALEU266
ALYS267
ASER269
APHE272
AGLY273
ACYS276
APHE277
APHE338
ALYS339
AARG442
ANAI500
AHOH3020
AHOH3021
AHOH3041
AHOH3042
AHOH3044
AHOH3052
AHOH3072
AHOH3085
AHOH3127
BARG260

site_idBC6
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAI B 500
ChainResidue
BHOH3059
BHOH3144
BHOH3155
BHOH3156
BILE10
BGLY11
BGLY13
BTYR14
BVAL15
BASP36
BVAL37
BARG41
BSER88
BVAL89
BASN90
BTHR91
BTYR108
BSER130
BTHR131
BGLU161
BLEU163
BGLU165
BCYS276
BLYS279
BARG346
BUPG501
BHOH3013
BHOH3021
BHOH3024
BHOH3040

site_idBC7
Number of Residues29
DetailsBINDING SITE FOR RESIDUE UPG B 501
ChainResidue
AARG260
BGLU161
BPHE162
BLEU163
BALA164
BGLU165
BLYS220
BASN224
BILE231
BPHE265
BLEU266
BLYS267
BSER269
BPHE272
BGLY273
BCYS276
BPHE277
BPHE338
BLYS339
BARG442
BNAI500
BHOH3013
BHOH3019
BHOH3023
BHOH3024
BHOH3027
BHOH3036
BHOH3056
BHOH3077

site_idBC8
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAI C 500
ChainResidue
CILE10
CGLY11
CGLY13
CTYR14
CVAL15
CASP36
CVAL37
CARG41
CSER88
CVAL89
CASN90
CTHR91
CTYR108
CSER130
CTHR131
CGLU161
CLEU163
CGLU165
CCYS276
CLYS279
CARG346
CUPG501
CHOH3015
CHOH3019
CHOH3020
CHOH3021
CHOH3024
CHOH3066
CHOH3115
CHOH3130
CHOH3269

site_idBC9
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG C 501
ChainResidue
CGLU161
CPHE162
CLEU163
CALA164
CGLU165
CLYS220
CASN224
CILE231
CPHE265
CLEU266
CLYS267
CSER269
CPHE272
CGLY273
CCYS276
CPHE277
CPHE338
CLYS339
CARG442
CNAI500
CHOH3015
CHOH3018
CHOH3019
CHOH3028
CHOH3035
CHOH3050
CHOH3053
CHOH3076
CHOH3145
DARG260

site_idCC1
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAI D 500
ChainResidue
DILE10
DGLY11
DGLY13
DTYR14
DVAL15
DASP36
DVAL37
DARG41
DSER88
DVAL89
DASN90
DTHR91
DTYR108
DSER130
DTHR131
DGLU161
DLEU163
DGLU165
DCYS276
DLYS279
DARG346
DUPG501
DHOH3013
DHOH3018
DHOH3028
DHOH3044
DHOH3103
DHOH3159
DHOH3181
DHOH3182

site_idCC2
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG D 501
ChainResidue
CARG260
DGLU161
DPHE162
DLEU163
DALA164
DGLU165
DLYS220
DASN224
DILE231
DPHE265
DLEU266
DLYS267
DSER269
DPHE272
DGLY273
DCYS276
DPHE277
DPHE338
DLYS339
DARG442
DNAI500
DHOH3013
DHOH3019
DHOH3021
DHOH3026
DHOH3037
DHOH3038
DHOH3044
DHOH3052
DHOH3164

site_idCC3
Number of Residues29
DetailsBINDING SITE FOR RESIDUE NAI E 500
ChainResidue
EILE10
EGLY11
EGLY13
ETYR14
EVAL15
EASP36
EVAL37
EARG41
ESER88
EVAL89
EASN90
ETHR91
ETYR108
ESER130
ETHR131
EGLU161
ELEU163
EGLU165
ECYS276
ELYS279
EARG346
EUPG501
EHOH3025
EHOH3026
EHOH3035
EHOH3050
EHOH3051
EHOH3067
EHOH3193

site_idCC4
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG E 501
ChainResidue
EGLU161
EPHE162
ELEU163
EALA164
EGLU165
ELYS220
EASN224
EILE231
EPHE265
ELEU266
ELYS267
ESER269
EPHE272
EGLY273
ECYS276
EPHE277
EPHE338
ELYS339
EARG442
ENAI500
EHOH3017
EHOH3025
EHOH3027
EHOH3030
EHOH3037
EHOH3050
EHOH3086
EHOH3116
EHOH3129
FARG260

site_idCC5
Number of Residues29
DetailsBINDING SITE FOR RESIDUE NAI F 500
ChainResidue
FILE10
FGLY11
FGLY13
FTYR14
FVAL15
FASP36
FVAL37
FARG41
FSER88
FVAL89
FASN90
FTHR91
FTYR108
FSER130
FTHR131
FGLU161
FLEU163
FGLU165
FCYS276
FLYS279
FARG346
FUPG501
FHOH3011
FHOH3019
FHOH3026
FHOH3036
FHOH3088
FHOH3163
FHOH3164

site_idCC6
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG F 501
ChainResidue
EARG260
FGLU161
FPHE162
FLEU163
FALA164
FGLU165
FLYS220
FASN224
FILE231
FPHE265
FLEU266
FLYS267
FSER269
FPHE272
FGLY273
FCYS276
FPHE277
FPHE338
FLYS339
FARG442
FNAI500
FHOH3011
FHOH3017
FHOH3023
FHOH3026
FHOH3029
FHOH3041
FHOH3042
FHOH3053
FHOH3150

site_idCC7
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAI G 500
ChainResidue
GILE10
GGLY11
GGLY13
GTYR14
GVAL15
GASP36
GVAL37
GARG41
GSER88
GVAL89
GASN90
GTHR91
GTYR108
GSER130
GTHR131
GGLU161
GLEU163
GGLU165
GCYS276
GLYS279
GARG346
GUPG501
GHOH3007
GHOH3008
GHOH3022
GHOH3033
GHOH3059
GHOH3079
GHOH3088
GHOH3123
GHOH3130

site_idCC8
Number of Residues29
DetailsBINDING SITE FOR RESIDUE UPG G 501
ChainResidue
GGLU161
GPHE162
GLEU163
GALA164
GGLU165
GLYS220
GASN224
GILE231
GPHE265
GLEU266
GLYS267
GSER269
GPHE272
GGLY273
GCYS276
GPHE277
GPHE338
GLYS339
GARG442
GNAI500
GHOH3007
GHOH3022
GHOH3040
GHOH3041
GHOH3063
GHOH3068
GHOH3074
GHOH3077
HARG260

site_idCC9
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAI H 500
ChainResidue
HILE10
HGLY11
HGLY13
HTYR14
HVAL15
HASP36
HVAL37
HARG41
HSER88
HVAL89
HASN90
HTHR91
HTYR108
HSER130
HTHR131
HGLU161
HLEU163
HGLU165
HCYS276
HLYS279
HARG346
HUPG501
HHOH3014
HHOH3021
HHOH3041
HHOH3048
HHOH3095
HHOH3097
HHOH3098
HHOH3109

site_idDC1
Number of Residues29
DetailsBINDING SITE FOR RESIDUE UPG H 501
ChainResidue
GARG260
HGLU161
HPHE162
HLEU163
HALA164
HGLU165
HLYS220
HASN224
HILE231
HPHE265
HLEU266
HLYS267
HSER269
HPHE272
HGLY273
HCYS276
HPHE277
HPHE338
HLYS339
HARG442
HNAI500
HHOH3014
HHOH3017
HHOH3024
HHOH3034
HHOH3048
HHOH3053
HHOH3054
HHOH3068

site_idDC2
Number of Residues29
DetailsBINDING SITE FOR RESIDUE NAI I 500
ChainResidue
IILE10
IGLY11
IGLY13
ITYR14
IVAL15
IASP36
IVAL37
IARG41
ISER88
IVAL89
IASN90
ITHR91
ITYR108
ISER130
ITHR131
IGLU161
ILEU163
IGLU165
ICYS276
ILYS279
IARG346
IUPG501
IHOH3010
IHOH3029
IHOH3036
IHOH3039
IHOH3042
IHOH3182
IHOH3183

site_idDC3
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG I 501
ChainResidue
IGLU161
IPHE162
ILEU163
IALA164
IGLU165
ILYS220
IASN224
IILE231
IPHE265
ILEU266
ILYS267
ISER269
IPHE272
IGLY273
ICYS276
IPHE277
IPHE338
ILYS339
IARG442
INAI500
IHOH3019
IHOH3026
IHOH3029
IHOH3036
IHOH3056
IHOH3078
IHOH3109
IHOH3120
IHOH3172
JARG260

site_idDC4
Number of Residues31
DetailsBINDING SITE FOR RESIDUE NAI J 500
ChainResidue
JILE10
JGLY11
JGLY13
JTYR14
JVAL15
JASP36
JVAL37
JARG41
JSER88
JVAL89
JASN90
JTHR91
JTYR108
JALA111
JSER130
JTHR131
JGLU161
JLEU163
JGLU165
JCYS276
JLYS279
JARG346
JUPG501
JHOH3021
JHOH3027
JHOH3046
JHOH3049
JHOH3051
JHOH3063
JHOH3173
JHOH3174

site_idDC5
Number of Residues30
DetailsBINDING SITE FOR RESIDUE UPG J 501
ChainResidue
IARG260
JGLU161
JPHE162
JLEU163
JALA164
JGLU165
JLYS220
JASN224
JILE231
JPHE265
JLEU266
JLYS267
JSER269
JPHE272
JGLY273
JCYS276
JPHE277
JPHE338
JLYS339
JARG442
JNAI500
JHOH3021
JHOH3022
JHOH3029
JHOH3045
JHOH3046
JHOH3050
JHOH3062
JHOH3085
JHOH3164

site_idDC6
Number of Residues30
DetailsBINDING SITE FOR RESIDUE NAI K 500
ChainResidue
KILE10
KGLY11
KGLY13
KTYR14
KVAL15
KASP36
KVAL37
KARG41
KSER88
KVAL89
KASN90
KTHR91
KTYR108
KSER130
KTHR131
KGLU161
KLEU163
KGLU165
KCYS276
KLYS279
KARG346
KUPG501
KHOH3029
KHOH3031
KHOH3039
KHOH3042
KHOH3048
KHOH3125
KHOH3126
KHOH3162

site_idDC7
Number of Residues29
DetailsBINDING SITE FOR RESIDUE UPG K 501
ChainResidue
KGLU161
KPHE162
KLEU163
KALA164
KGLU165
KLYS220
KASN224
KILE231
KPHE265
KLYS267
KSER269
KPHE272
KGLY273
KCYS276
KPHE277
KPHE338
KLYS339
KARG442
KNAI500
KHOH3034
KHOH3042
KHOH3048
KHOH3050
KHOH3055
KHOH3057
KHOH3062
KHOH3083
KHOH3201
LARG260

site_idDC8
Number of Residues29
DetailsBINDING SITE FOR RESIDUE NAI L 500
ChainResidue
LILE10
LGLY11
LGLY13
LTYR14
LVAL15
LASP36
LVAL37
LARG41
LSER88
LVAL89
LASN90
LTHR91
LTYR108
LALA111
LSER130
LTHR131
LGLU161
LLEU163
LGLU165
LCYS276
LLYS279
LARG346
LUPG501
LHOH3015
LHOH3017
LHOH3032
LHOH3048
LHOH3105
LHOH3144

site_idDC9
Number of Residues29
DetailsBINDING SITE FOR RESIDUE UPG L 501
ChainResidue
KARG260
LGLU161
LPHE162
LLEU163
LALA164
LGLU165
LLYS220
LASN224
LILE231
LPHE265
LLYS267
LSER269
LPHE272
LGLY273
LCYS276
LPHE277
LPHE338
LLYS339
LARG442
LNAI500
LHOH3015
LHOH3025
LHOH3029
LHOH3032
LHOH3036
LHOH3041
LHOH3070
LHOH3108
LHOH3111

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsACT_SITE: Proton donor/acceptor => ECO:0000269|PubMed:22123821
ChainResidueDetails
AGLU161
ELYS220
FGLU161
FLYS220
GGLU161
GLYS220
HGLU161
HLYS220
IGLU161
ILYS220
JGLU161
ALYS220
JLYS220
KGLU161
KLYS220
LGLU161
LLYS220
BGLU161
BLYS220
CGLU161
CLYS220
DGLU161
DLYS220
EGLU161

site_idSWS_FT_FI2
Number of Residues12
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:21502315, ECO:0000269|PubMed:21984906, ECO:0000269|PubMed:22123821
ChainResidueDetails
ACYS276
JCYS276
KCYS276
LCYS276
BCYS276
CCYS276
DCYS276
ECYS276
FCYS276
GCYS276
HCYS276
ICYS276

site_idSWS_FT_FI3
Number of Residues60
DetailsBINDING: BINDING => ECO:0000269|PubMed:21502315, ECO:0000269|PubMed:21595445, ECO:0000269|PubMed:21984906, ECO:0007744|PDB:2Q3E, ECO:0007744|PDB:2QG4, ECO:0007744|PDB:3PRJ, ECO:0007744|PDB:3PTZ, ECO:0007744|PDB:3TDK
ChainResidueDetails
AGLY11
BCYS276
CGLY11
CASP36
CARG41
CVAL89
CCYS276
DGLY11
DASP36
DARG41
DVAL89
AASP36
DCYS276
EGLY11
EASP36
EARG41
EVAL89
ECYS276
FGLY11
FASP36
FARG41
FVAL89
AARG41
FCYS276
GGLY11
GASP36
GARG41
GVAL89
GCYS276
HGLY11
HASP36
HARG41
HVAL89
AVAL89
HCYS276
IGLY11
IASP36
IARG41
IVAL89
ICYS276
JGLY11
JASP36
JARG41
JVAL89
ACYS276
JCYS276
KGLY11
KASP36
KARG41
KVAL89
KCYS276
LGLY11
LASP36
LARG41
LVAL89
BGLY11
LCYS276
BASP36
BARG41
BVAL89

site_idSWS_FT_FI4
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:21502315, ECO:0000269|PubMed:21595445
ChainResidueDetails
ASER130
JSER130
KSER130
LSER130
BSER130
CSER130
DSER130
ESER130
FSER130
GSER130
HSER130
ISER130

site_idSWS_FT_FI5
Number of Residues48
DetailsBINDING: BINDING => ECO:0000269|PubMed:23106432, ECO:0000305|PubMed:21502315, ECO:0000305|PubMed:21595445, ECO:0007744|PDB:2QG4, ECO:0007744|PDB:3PRJ, ECO:0007744|PDB:3PTZ, ECO:0007744|PDB:4EDF
ChainResidueDetails
AGLU161
CLYS220
CLYS267
CPHE338
DGLU161
DLYS220
DLYS267
DPHE338
EGLU161
ELYS220
ELYS267
ALYS220
EPHE338
FGLU161
FLYS220
FLYS267
FPHE338
GGLU161
GLYS220
GLYS267
GPHE338
HGLU161
ALYS267
HLYS220
HLYS267
HPHE338
IGLU161
ILYS220
ILYS267
IPHE338
JGLU161
JLYS220
JLYS267
APHE338
JPHE338
KGLU161
KLYS220
KLYS267
KPHE338
LGLU161
LLYS220
LLYS267
LPHE338
BGLU161
BLYS220
BLYS267
BPHE338
CGLU161

site_idSWS_FT_FI6
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:21502315, ECO:0007744|PDB:2Q3E, ECO:0007744|PDB:2QG4
ChainResidueDetails
AGLU165
JGLU165
KGLU165
LGLU165
BGLU165
CGLU165
DGLU165
EGLU165
FGLU165
GGLU165
HGLU165
IGLU165

site_idSWS_FT_FI7
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:23106432, ECO:0000269|PubMed:27966912, ECO:0000305|PubMed:21502315, ECO:0000305|PubMed:21595445, ECO:0007744|PDB:2QG4, ECO:0007744|PDB:3PRJ, ECO:0007744|PDB:3PTZ, ECO:0007744|PDB:4EDF, ECO:0007744|PDB:5TJH
ChainResidueDetails
AARG260
JARG260
KARG260
LARG260
BARG260
CARG260
DARG260
EARG260
FARG260
GARG260
HARG260
IARG260

site_idSWS_FT_FI8
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:21502315, ECO:0000269|PubMed:21595445, ECO:0000269|PubMed:21984906, ECO:0000269|PubMed:22123821, ECO:0007744|PDB:2Q3E, ECO:0007744|PDB:2QG4, ECO:0007744|PDB:3PRJ, ECO:0007744|PDB:3PTZ, ECO:0007744|PDB:3TDK
ChainResidueDetails
AARG346
JARG346
KARG346
LARG346
BARG346
CARG346
DARG346
EARG346
FARG346
GARG346
HARG346
IARG346

site_idSWS_FT_FI9
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:22123821, ECO:0000269|PubMed:23106432, ECO:0000305|PubMed:21502315, ECO:0000305|PubMed:21595445, ECO:0007744|PDB:2QG4, ECO:0007744|PDB:3KHU, ECO:0007744|PDB:3PRJ, ECO:0007744|PDB:3PTZ, ECO:0007744|PDB:4EDF
ChainResidueDetails
AARG442
JARG442
KARG442
LARG442
BARG442
CARG442
DARG442
EARG442
FARG442
GARG442
HARG442
IARG442

site_idSWS_FT_FI10
Number of Residues12
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS107
JLYS107
KLYS107
LLYS107
BLYS107
CLYS107
DLYS107
ELYS107
FLYS107
GLYS107
HLYS107
ILYS107

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
AASP280
AASN224
ATHR131
ACYS276
ALYS220
AGLU165

site_idCSA10
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
JASP280
JASN224
JTHR131
JCYS276
JLYS220
JGLU165

site_idCSA11
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
KASP280
KASN224
KTHR131
KCYS276
KLYS220
KGLU165

site_idCSA12
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
LASP280
LASN224
LTHR131
LCYS276
LLYS220
LGLU165

site_idCSA2
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
BASP280
BASN224
BTHR131
BCYS276
BLYS220
BGLU165

site_idCSA3
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
CASP280
CASN224
CTHR131
CCYS276
CLYS220
CGLU165

site_idCSA4
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
DASP280
DASN224
DTHR131
DCYS276
DLYS220
DGLU165

site_idCSA5
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
EASP280
EASN224
ETHR131
ECYS276
ELYS220
EGLU165

site_idCSA6
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
FASP280
FASN224
FTHR131
FCYS276
FLYS220
FGLU165

site_idCSA7
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
GASP280
GASN224
GTHR131
GCYS276
GLYS220
GGLU165

site_idCSA8
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
HASP280
HASN224
HTHR131
HCYS276
HLYS220
HGLU165

site_idCSA9
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dli
ChainResidueDetails
IASP280
IASN224
ITHR131
ICYS276
ILYS220
IGLU165

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon