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2PMD

The structures of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the GDP-bound form.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0001731biological_processformation of translation preinitiation complex
A0003743molecular_functiontranslation initiation factor activity
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0006412biological_processtranslation
A0006413biological_processtranslational initiation
A0006414biological_processtranslational elongation
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
B0000049molecular_functiontRNA binding
B0001731biological_processformation of translation preinitiation complex
B0003743molecular_functiontranslation initiation factor activity
B0003746molecular_functiontranslation elongation factor activity
B0003924molecular_functionGTPase activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0006412biological_processtranslation
B0006413biological_processtranslational initiation
B0006414biological_processtranslational elongation
B0016787molecular_functionhydrolase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GDP A 416
ChainResidue
AVAL18
AASP152
AVAL153
ASER184
AALA185
ALEU186
APPV419
AASP19
AGLY21
ALYS22
ATHR23
ATHR24
AGLY96
AASN149
ALYS150

site_idAC2
Number of Residues14
DetailsBINDING SITE FOR RESIDUE GDP B 416
ChainResidue
BASP19
BGLY21
BLYS22
BTHR23
BTHR24
BGLY96
BASN149
BLYS150
BASP152
BVAL153
BSER184
BALA185
BLEU186
BPPV418

site_idAC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GNP A 417
ChainResidue
AGLU40
AARG43
AGLY44
AMET45
AASP222
AVAL223
AASN224
ALYS225
ASER278
AILE279
AARG280
AALA296
AGLY298
ALYS307
AHOH421

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PPV B 417
ChainResidue
BGLY258
BLEU259
BARG260
BTYR269
BASN310
BLEU311
BHOH434
BHOH461

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PPV A 418
ChainResidue
AGLY258
ALEU259
AARG260
AASN310
AARG384

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PPV A 419
ChainResidue
ALEU186
AHIS187
AGDP416

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PPV B 418
ChainResidue
BLEU186
BHIS187
BPRO324
BGDP416
BHOH473

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PPV B 419
ChainResidue
AGLN229
APHE230
BTHR274
BLYS275
BTYR300
BHOH456

site_idAC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PPV A 420
ChainResidue
ATHR274
ALYS275
ATYR300
AHOH459
AHOH468
BTHR228
BGLN229
BPHE230
BHOH444

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RD1
ChainResidueDetails
AASP19
AGLY44
BASP19
BGLY44

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:16407071, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:2AHO
ChainResidueDetails
ATHR23
ATHR46
BTHR23
BTHR46

site_idSWS_FT_FI3
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q8U082, ECO:0000255|HAMAP-Rule:MF_00119
ChainResidueDetails
ACYS59
ACYS62
ACYS74
ACYS77
BCYS59
BCYS62
BCYS74
BCYS77

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RCY, ECO:0007744|PDB:4RD1
ChainResidueDetails
AASN149
ASER184
BASN149
BSER184

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AASP19

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BASP19

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AHIS97

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BHIS97

222036

PDB entries from 2024-07-03

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