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2PKO

Crystal structure of yeast Urm1 at 1.8 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0001403biological_processinvasive growth in response to glucose limitation
A0002098biological_processtRNA wobble uridine modification
A0002143biological_processtRNA wobble position uridine thiolation
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0007114biological_processcell budding
A0008033biological_processtRNA processing
A0031386molecular_functionprotein tag activity
A0032447biological_processprotein urmylation
A0034227biological_processtRNA thio-modification
A0034599biological_processcellular response to oxidative stress
A0042803molecular_functionprotein homodimerization activity
A0097163molecular_functionsulfur carrier activity
Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: 1-thioglycine => ECO:0000255|HAMAP-Rule:MF_03048, ECO:0000269|PubMed:18491921, ECO:0000269|PubMed:19145231, ECO:0000269|PubMed:19151091
ChainResidueDetails
AGLY99

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|HAMAP-Rule:MF_03048
ChainResidueDetails
AGLY99

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PDB entries from 2024-07-24

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