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2P4Y

Crystal structure of human PPAR-gamma-ligand binding domain complexed with an indole-based modulator

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004879molecular_functionnuclear receptor activity
A0005634cellular_componentnucleus
A0006355biological_processregulation of DNA-templated transcription
B0003677molecular_functionDNA binding
B0004879molecular_functionnuclear receptor activity
B0005634cellular_componentnucleus
B0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE C03 A 478
ChainResidue
APHE226
AMET329
ALEU330
AVAL339
ALEU340
AILE341
ASER342
ALEU353
APHE363
AMET364
AHIS449
AGLY284
ATRS479
ACYS285
AARG288
ASER289
AALA292
AILE296
AILE326
ATYR327

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE C03 B 478
ChainResidue
BPHE226
BCYS285
BARG288
BSER289
BALA292
BILE296
BILE326
BTYR327
BMET329
BLEU330
BLEU333
BVAL339
BLEU340
BILE341
BSER342
BLEU353
BMET364
BHIS449

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE TRS A 479
ChainResidue
APHE282
AGLN286
ASER289
AHIS323
APHE363
AHIS449
ALEU453
ALEU465
ALEU469
ATYR473
AC03478

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
ChainResidueDetails
AGLN286
AHIS323
AHIS449
ATYR473
BGLN286
BHIS323
BHIS449
BTYR473

site_idSWS_FT_FI2
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
ChainResidueDetails
ALYS224
BLYS224

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PDB entries from 2024-07-24

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