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2OLC

Crystal structure of 5-methylthioribose kinase in complex with ADP-2Ho

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0009086biological_processmethionine biosynthetic process
A0016301molecular_functionkinase activity
A0019284biological_processL-methionine salvage from S-adenosylmethionine
A0019509biological_processL-methionine salvage from methylthioadenosine
A0046522molecular_functionS-methyl-5-thioribose kinase activity
B0005524molecular_functionATP binding
B0009086biological_processmethionine biosynthetic process
B0016301molecular_functionkinase activity
B0019284biological_processL-methionine salvage from S-adenosylmethionine
B0019509biological_processL-methionine salvage from methylthioadenosine
B0046522molecular_functionS-methyl-5-thioribose kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HO A 400
ChainResidue
AASP250
AADP999
AHOH1001
AHOH1002

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE HO A 401
ChainResidue
AASP250
AGLU252
AADP999
AHOH1000
AHOH1001

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE CPS A 777
ChainResidue
ALYS377
AASP386
AGLU389
ALEU390
BLYS377
BGLU380
BLEU393
BLEU394
BHOH1118
BHOH1140
BHOH1186

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ADP A 999
ChainResidue
AASP40
AASN44
AILE59
ALYS61
AMET114
AGLU115
AASP116
ALEU117
ASER118
APHE240
AASP250
AGLU252
AHO400
AHO401
AHOH1001
AHOH1002
AHOH1024
AHOH1048

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HO B 400
ChainResidue
BASP250
BADP999
BHOH1000
BHOH1001

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HO B 401
ChainResidue
BASP250
BGLU252
BADP999
BHOH1002

site_idAC7
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ADP B 999
ChainResidue
BASP40
BASN44
BILE59
BLYS61
BMET114
BGLU115
BASP116
BLEU117
BILE122
BPHE240
BASP250
BGLU252
BHO400
BHO401
BHOH1000
BHOH1001
BHOH1099
BHOH1196

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:17372354, ECO:0000269|PubMed:17522047
ChainResidueDetails
AASN44
ALYS61
AGLU115
AASP250
BASN44
BLYS61
BGLU115
BASP250

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:17522047
ChainResidueDetails
AASP233
AARG340
BASP233
BARG340

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1l8t
ChainResidueDetails
AASP233

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1l8t
ChainResidueDetails
BASP233

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PDB entries from 2024-07-31

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