2OLC
Crystal structure of 5-methylthioribose kinase in complex with ADP-2Ho
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X8C |
Synchrotron site | NSLS |
Beamline | X8C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-08-27 |
Detector | ADSC QUANTUM 4r |
Wavelength(s) | 1.5362 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 215.200, 83.600, 51.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 107.830 - 2.000 |
R-factor | 0.215 |
Rwork | 0.214 |
R-free | 0.25000 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.324 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (9.5L) |
Phasing software | SHELX |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.730 | 71.730 | 2.070 |
High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
Rmerge | 0.093 | 0.038 | 0.434 |
Total number of observations | 202560 | 164510 | |
Number of reflections | 63253 | ||
<I/σ(I)> | 21.9 | 52.6 | 9.2 |
Completeness [%] | 98.8 | 99.7 | 97.5 |
Redundancy | 26.94 | 29.43 | 26.57 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 22%(w/v) PEG2000MME, 0.1M TrisHCl pH 7.5 and 0.3M sodium acetate, vapor diffusion, hanging drop, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 22%(w/v) PEG2000MME, 0.1M TrisHCl pH 7.5 and 0.3M sodium acetate, vapor diffusion, hanging drop, temperature 298K |