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2ODJ

Crystal structure of the outer membrane protein OprD from Pseudomonas aeruginosa

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0006811biological_processmonoatomic ion transport
A0008233molecular_functionpeptidase activity
A0008236molecular_functionserine-type peptidase activity
A0009279cellular_componentcell outer membrane
A0015288molecular_functionporin activity
A0015802biological_processbasic amino acid transport
A0016020cellular_componentmembrane
A0016787molecular_functionhydrolase activity
A0019867cellular_componentouter membrane
A0046930cellular_componentpore complex
A0055085biological_processtransmembrane transport
B0006508biological_processproteolysis
B0006811biological_processmonoatomic ion transport
B0008233molecular_functionpeptidase activity
B0008236molecular_functionserine-type peptidase activity
B0009279cellular_componentcell outer membrane
B0015288molecular_functionporin activity
B0015802biological_processbasic amino acid transport
B0016020cellular_componentmembrane
B0016787molecular_functionhydrolase activity
B0019867cellular_componentouter membrane
B0046930cellular_componentpore complex
B0055085biological_processtransmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE C8E B 429
ChainResidue
ASER109
ATHR111
ALEU142
AGLU146
BTYR27
BTRP42
BPHE388
BVAL413

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE C8E A 429
ChainResidue
APHE231

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE C8E A 430
ChainResidue
AILE14
AGLU15
ATYR50
AALA65
AGLU363
ALEU420
BLEU256

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE C8E B 430
ChainResidue
BTYR260
BPHE267
BLEU269
BARG319
BVAL336

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE C8E A 431
ChainResidue
AVAL329
ATYR376
APHE409
BTYR191
BLEU201

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE C8E A 432
ChainResidue
ATYR320
AVAL336
ATRP394
AC8E433
BTHR111
BGLU146

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE C8E A 433
ChainResidue
APHE267
ATHR268
AALA318
AARG319
ATHR370
AC8E432
AC8E434

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE C8E A 434
ChainResidue
ATYR338
AC8E433
BILE14

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsActive site: {"evidences":[{"source":"PubMed","id":"9636669","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

245663

PDB entries from 2025-12-03

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