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2O7O

Crystal structure analysis of TetR(D) complex with doxycycline

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0045892biological_processnegative regulation of DNA-templated transcription
A0046677biological_processresponse to antibiotic
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 223
ChainResidue
AHIS100
ADXT222
AHOH224
AHOH225
AHOH226

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
AARG92
AARG92
ATYR93
ATYR93
AARG62
AARG62
AHIS63
AHIS63

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 302
ChainResidue
ALEU4
AGLN76
AARG80
AHOH394

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 303
ChainResidue
ASER2
AARG3
ASER74
ASER77

site_idAC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE DXT A 222
ChainResidue
AHIS64
ASER67
AASN82
APHE86
AHIS100
AARG104
APRO105
AVAL113
AGLN116
AILE134
ASER138
ALEU174
AMET177
AMG223
AHOH225
AHOH226
AHOH321
AHOH343

Functional Information from PROSITE/UniProt
site_idPS01081
Number of Residues32
DetailsHTH_TETR_1 TetR-type HTH domain signature. GIdglTTrkLaqklgIEqPtLYwHVkNKralL
ChainResidueDetails
AGLY21-LEU52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues19
DetailsDNA_BIND: H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00335
ChainResidueDetails
ATHR27-LYS46

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:8153629, ECO:0007744|PDB:2TRT
ChainResidueDetails
AASP65
AALA83
ALEU101

223166

PDB entries from 2024-07-31

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