2O52
Crystal structure of human RAB4B in complex with GDP
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 602 |
| Chain | Residue |
| A | SER22 |
| A | GDP601 |
| A | HOH1004 |
| A | HOH1005 |
| A | HOH1006 |
| A | HOH1007 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG B 602 |
| Chain | Residue |
| B | HOH605 |
| B | HOH606 |
| B | HOH607 |
| B | SER22 |
| B | GDP601 |
| B | HOH604 |
| site_id | AC3 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE GDP A 601 |
| Chain | Residue |
| A | SER16 |
| A | GLY18 |
| A | THR19 |
| A | GLY20 |
| A | LYS21 |
| A | SER22 |
| A | CYS23 |
| A | ASN121 |
| A | LYS122 |
| A | ASP124 |
| A | LEU125 |
| A | SER151 |
| A | ALA152 |
| A | LEU153 |
| A | MG602 |
| A | HOH1005 |
| A | HOH1006 |
| A | HOH1007 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BME A 603 |
| Chain | Residue |
| A | CYS23 |
| A | LEU153 |
| site_id | AC5 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE GDP B 601 |
| Chain | Residue |
| A | GLY53 |
| A | GLY54 |
| A | LYS55 |
| B | SER16 |
| B | GLY18 |
| B | THR19 |
| B | GLY20 |
| B | LYS21 |
| B | SER22 |
| B | CYS23 |
| B | ARG69 |
| B | ASN121 |
| B | LYS122 |
| B | ASP124 |
| B | LEU125 |
| B | SER151 |
| B | ALA152 |
| B | LEU153 |
| B | MG602 |
| B | BME603 |
| B | HOH604 |
| B | HOH606 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BME B 603 |
| Chain | Residue |
| B | CYS23 |
| B | GDP601 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE UNX A 1003 |
| Chain | Residue |
| A | HOH1023 |
| B | ASN157 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 18 |
| Details | Motif: {"description":"Switch 2","evidences":[{"source":"UniProtKB","id":"P61106","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 22 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P20338","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"FEB-2009","submissionDatabase":"PDB data bank","title":"Crystal structure of human RAB4B in complex with GDP.","authoringGroup":["Structural genomics consortium (SGC)"]}},{"source":"PDB","id":"2O52","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"5-glutamyl serotonin","evidences":[{"source":"UniProtKB","id":"Q91ZR1","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLN67 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| B | GLN67 |
| site_id | CSA3 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLY18 |
| site_id | CSA4 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| B | GLY18 |
