2O3F
Structural Genomics, the crystal structure of the N-terminal domain of the putative transcriptional regulator ybbH from Bacillus subtilis subsp. subtilis str. 168.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0097367 | molecular_function | carbohydrate derivative binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0097367 | molecular_function | carbohydrate derivative binding |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003700 | molecular_function | DNA-binding transcription factor activity |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0097367 | molecular_function | carbohydrate derivative binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 C 201 |
| Chain | Residue |
| C | ALA29 |
| C | HIS30 |
| C | PRO31 |
| C | HIS32 |
| C | MLY33 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 B 202 |
| Chain | Residue |
| B | HOH228 |
| B | HOH247 |
| C | MLY15 |
| B | HIS30 |
| B | PRO31 |
| B | HIS32 |
| B | MLY33 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 A 203 |
| Chain | Residue |
| A | ALA29 |
| A | HIS30 |
| A | PRO31 |
| A | HIS32 |
| A | MLY33 |
| B | MLY15 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 204 |
| Chain | Residue |
| B | SER49 |
| B | ARG55 |
| B | HOH244 |
| B | HOH249 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 C 205 |
| Chain | Residue |
| C | SER49 |
| C | ALA51 |
| C | ALA52 |
| C | ARG55 |
| C | SO4212 |
| C | HOH244 |
| C | HOH256 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 206 |
| Chain | Residue |
| A | SER49 |
| A | ALA51 |
| A | ALA52 |
| A | ARG55 |
| A | HOH256 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 207 |
| Chain | Residue |
| B | GLN10 |
| B | MLY13 |
| B | HIS14 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 C 208 |
| Chain | Residue |
| C | GLN10 |
| C | MLY13 |
| C | HIS14 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 209 |
| Chain | Residue |
| A | GLN10 |
| A | MLY13 |
| A | HIS14 |
| site_id | BC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 210 |
| Chain | Residue |
| A | PRO17 |
| A | PRO18 |
| A | SER19 |
| A | GLU20 |
| A | ARG55 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 211 |
| Chain | Residue |
| B | PRO17 |
| B | PRO18 |
| B | SER19 |
| B | GLU20 |
| B | ARG55 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 C 212 |
| Chain | Residue |
| C | PRO17 |
| C | PRO18 |
| C | SER19 |
| C | GLU20 |
| C | ARG55 |
| C | SO4205 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 C 213 |
| Chain | Residue |
| C | ILE54 |
| C | GLY64 |
| C | PHE65 |
| C | GLN66 |
| C | HOH225 |
| C | HOH240 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 214 |
| Chain | Residue |
| A | GLY64 |
| A | PHE65 |
| A | GLN66 |
| A | HOH220 |
| A | HOH221 |
| site_id | BC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 215 |
| Chain | Residue |
| B | GLY64 |
| B | PHE65 |
| B | GLN66 |
| B | HOH238 |
| B | HOH250 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 57 |
| Details | DNA_BIND: H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00390 |
| Chain | Residue | Details |
| A | VAL39-MLY58 | |
| B | VAL39-MLY58 | |
| C | VAL39-MLY58 |
