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2NYG

Crystal structure of YokD protein from Bacillus subtilis

Functional Information from GO Data
ChainGOidnamespacecontents
A0016746molecular_functionacyltransferase activity
A0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
A0046677biological_processresponse to antibiotic
B0016746molecular_functionacyltransferase activity
B0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
B0046677biological_processresponse to antibiotic
C0016746molecular_functionacyltransferase activity
C0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
C0046677biological_processresponse to antibiotic
D0016746molecular_functionacyltransferase activity
D0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
D0046677biological_processresponse to antibiotic
E0016746molecular_functionacyltransferase activity
E0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
E0046677biological_processresponse to antibiotic
F0016746molecular_functionacyltransferase activity
F0046353molecular_functionaminoglycoside 3-N-acetyltransferase activity
F0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE COA A 301
ChainResidue
ALEU2
AGLY48
AGLY111
AMET112
AGLY113
AGLN114
AALA176
ASER180
AHOH302
AILE5
ASER37
ASER38
ALEU39
ASER40
AGLY43
ATRP44
AVAL45

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE COA B 302
ChainResidue
BSER37
BSER38
BLEU39
BSER40
BGLY43
BTRP44
BVAL45
BGLY48
BGLY111
BMET112
BGLY113
BGLN114
BALA176
BSER180
BHOH318

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE COA C 303
ChainResidue
CLEU2
CSER37
CSER38
CLEU39
CSER40
CGLY43
CTRP44
CVAL45
CGLY48
CGLY111
CMET112
CGLY113
CGLN114
CALA176
CSER180
CHOH304
CHOH309
CHOH316

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE COA D 304
ChainResidue
DLEU2
DILE5
DSER37
DSER38
DLEU39
DSER40
DGLY43
DTRP44
DVAL45
DGLY48
DMET112
DGLY113
DGLN114
DALA176
DSER180
DHOH305
DHOH312
DHOH327

site_idAC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE COA E 305
ChainResidue
ESER37
ESER38
ELEU39
ESER40
EGLY43
ETRP44
EVAL45
EGLY48
EGLY111
EMET112
EGLY113
EGLN114
EALA176
ESER180
EHOH306
EHOH308
EHOH313
EHOH327

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING:
ChainResidueDetails
ALEU39
BLEU39
CLEU39
DLEU39
ELEU39
FLEU39

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|Ref.2
ChainResidueDetails
AGLN114
BGLN114
CGLN114
DGLN114
EGLN114
FGLN114

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PDB entries from 2024-06-26

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