2NY7
HIV-1 gp120 Envelope Glycoprotein Complexed with the Broadly Neutralizing CD4-Binding-Site Antibody b12
Functional Information from GO Data
Chain | GOid | namespace | contents |
G | 0019031 | cellular_component | viral envelope |
L | 0002250 | biological_process | adaptive immune response |
L | 0003823 | molecular_function | antigen binding |
L | 0005576 | cellular_component | extracellular region |
L | 0005615 | cellular_component | extracellular space |
L | 0005886 | cellular_component | plasma membrane |
L | 0006955 | biological_process | immune response |
L | 0016064 | biological_process | immunoglobulin mediated immune response |
L | 0019814 | cellular_component | immunoglobulin complex |
L | 0050853 | biological_process | B cell receptor signaling pathway |
L | 0070062 | cellular_component | extracellular exosome |
L | 0071735 | cellular_component | IgG immunoglobulin complex |
L | 0071738 | cellular_component | IgD immunoglobulin complex |
L | 0071742 | cellular_component | IgE immunoglobulin complex |
L | 0071745 | cellular_component | IgA immunoglobulin complex |
L | 0071753 | cellular_component | IgM immunoglobulin complex |
L | 0072562 | cellular_component | blood microparticle |
Functional Information from PROSITE/UniProt
site_id | PS00290 |
Number of Residues | 7 |
Details | IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YICNVNH |
Chain | Residue | Details |
H | TYR206-HIS212 | |
L | TYR192-HIS198 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083 |
Chain | Residue | Details |
G | PHE93 | |
G | ILE201 | |
G | PRO212 | |
G | ILE272 | |
G | ASN397 | |
G | ASN406 |
site_id | SWS_FT_FI2 |
Number of Residues | 5 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:14981267, ECO:0000269|PubMed:26972002, ECO:0000269|PubMed:9641677 |
Chain | Residue | Details |
G | MET104 | |
G | CYS247 | |
G | ALA266 | |
G | ASN392 | |
G | ASN448 |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:14981267, ECO:0000269|PubMed:26972002 |
Chain | Residue | Details |
G | CYS205 |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:14981267, ECO:0000269|PubMed:23539181, ECO:0000269|PubMed:26972002, ECO:0000269|PubMed:9641677 |
Chain | Residue | Details |
G | PHE233 |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:14981267, ECO:0000269|PubMed:9641677 |
Chain | Residue | Details |
G | LEU260 |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:21998254, ECO:0000269|PubMed:26972002, ECO:0000269|PubMed:9641677 |
Chain | Residue | Details |
G | ASN332 |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:26972002, ECO:0000269|PubMed:9641677 |
Chain | Residue | Details |
G | ASN339 | |
G | ASN386 |
site_id | SWS_FT_FI8 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:17301785, ECO:0000269|PubMed:19965434, ECO:0007744|PDB:2NY7, ECO:0007744|PDB:3IDX, ECO:0007744|PDB:3IDY |
Chain | Residue | Details |
G | ASN356 |
site_id | SWS_FT_FI9 |
Number of Residues | 1 |
Details | CARBOHYD: N-linked (GlcNAc...) asparagine; by host => ECO:0000255|HAMAP-Rule:MF_04083, ECO:0000269|PubMed:11188697, ECO:0000269|PubMed:14981267 |
Chain | Residue | Details |
G | ASN463 |