2NV9
The X-ray Crystal Structure of the Paramecium bursaria Chlorella virus arginine decarboxylase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003824 | molecular_function | catalytic activity |
| A | 0004586 | molecular_function | ornithine decarboxylase activity |
| A | 0006596 | biological_process | polyamine biosynthetic process |
| A | 0016829 | molecular_function | lyase activity |
| A | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| B | 0003824 | molecular_function | catalytic activity |
| B | 0004586 | molecular_function | ornithine decarboxylase activity |
| B | 0006596 | biological_process | polyamine biosynthetic process |
| B | 0016829 | molecular_function | lyase activity |
| B | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| C | 0003824 | molecular_function | catalytic activity |
| C | 0004586 | molecular_function | ornithine decarboxylase activity |
| C | 0006596 | biological_process | polyamine biosynthetic process |
| C | 0016829 | molecular_function | lyase activity |
| C | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| D | 0003824 | molecular_function | catalytic activity |
| D | 0004586 | molecular_function | ornithine decarboxylase activity |
| D | 0006596 | biological_process | polyamine biosynthetic process |
| D | 0016829 | molecular_function | lyase activity |
| D | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| E | 0003824 | molecular_function | catalytic activity |
| E | 0004586 | molecular_function | ornithine decarboxylase activity |
| E | 0006596 | biological_process | polyamine biosynthetic process |
| E | 0016829 | molecular_function | lyase activity |
| E | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| F | 0003824 | molecular_function | catalytic activity |
| F | 0004586 | molecular_function | ornithine decarboxylase activity |
| F | 0006596 | biological_process | polyamine biosynthetic process |
| F | 0016829 | molecular_function | lyase activity |
| F | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| G | 0003824 | molecular_function | catalytic activity |
| G | 0004586 | molecular_function | ornithine decarboxylase activity |
| G | 0006596 | biological_process | polyamine biosynthetic process |
| G | 0016829 | molecular_function | lyase activity |
| G | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
| H | 0003824 | molecular_function | catalytic activity |
| H | 0004586 | molecular_function | ornithine decarboxylase activity |
| H | 0006596 | biological_process | polyamine biosynthetic process |
| H | 0016829 | molecular_function | lyase activity |
| H | 0033387 | biological_process | putrescine biosynthetic process from arginine, via ornithine |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE PLP A 2001 |
| Chain | Residue |
| A | LYS48 |
| A | GLU252 |
| A | GLY254 |
| A | ARG255 |
| A | TYR353 |
| A | HOH2005 |
| B | CYS324 |
| A | ASP67 |
| A | ALA90 |
| A | ARG133 |
| A | HIS176 |
| A | SER179 |
| A | GLY180 |
| A | GLY215 |
| A | GLY216 |
| site_id | AC2 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE PLP B 2002 |
| Chain | Residue |
| A | CYS324 |
| B | ALA46 |
| B | LYS48 |
| B | ASP67 |
| B | ALA90 |
| B | ARG133 |
| B | HIS176 |
| B | SER179 |
| B | GLY180 |
| B | GLY215 |
| B | GLY216 |
| B | GLU252 |
| B | GLY254 |
| B | ARG255 |
| B | TYR353 |
| B | HOH2013 |
| B | HOH2017 |
| site_id | AC3 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE PLP C 2003 |
| Chain | Residue |
| C | ALA46 |
| C | LYS48 |
| C | ASP67 |
| C | ARG133 |
| C | HIS176 |
| C | SER179 |
| C | GLY180 |
| C | GLY215 |
| C | GLY216 |
| C | GLU252 |
| C | PRO253 |
| C | GLY254 |
| C | ARG255 |
| C | TYR353 |
| C | HOH2006 |
| C | HOH2022 |
| D | CYS324 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE PLP D 2004 |
| Chain | Residue |
| C | CYS324 |
| D | ALA46 |
| D | LYS48 |
| D | ASP67 |
| D | ALA90 |
| D | ARG133 |
| D | HIS176 |
| D | SER179 |
| D | GLY180 |
| D | GLY215 |
| D | GLY216 |
| D | GLU252 |
| D | GLY254 |
| D | ARG255 |
| D | TYR353 |
| D | HOH2010 |
| D | HOH2035 |
| site_id | AC5 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE PLP E 2005 |
| Chain | Residue |
| E | ALA46 |
| E | LYS48 |
| E | ASP67 |
| E | ALA90 |
| E | ARG133 |
| E | HIS176 |
| E | SER179 |
| E | GLY180 |
| E | GLY215 |
| E | GLY216 |
| E | GLU252 |
| E | GLY254 |
| E | ARG255 |
| E | TYR353 |
| E | HOH2020 |
| E | HOH2048 |
| F | CYS324 |
| site_id | AC6 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE PLP F 2006 |
| Chain | Residue |
| E | CYS324 |
| F | ALA46 |
| F | LYS48 |
| F | ASP67 |
| F | ARG133 |
| F | HIS176 |
| F | SER179 |
| F | GLY215 |
| F | GLY216 |
| F | GLU252 |
| F | GLY254 |
| F | ARG255 |
| F | TYR353 |
| F | HOH2009 |
| F | HOH2034 |
| F | HOH2114 |
| site_id | AC7 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE PLP G 2007 |
| Chain | Residue |
| G | LYS48 |
| G | ASP67 |
| G | ALA90 |
| G | ARG133 |
| G | HIS176 |
| G | SER179 |
| G | GLY215 |
| G | GLY216 |
| G | GLU252 |
| G | GLY254 |
| G | ARG255 |
| G | TYR353 |
| G | HOH2009 |
| G | HOH2019 |
| H | CYS324 |
| site_id | AC8 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE PLP H 2008 |
| Chain | Residue |
| G | CYS324 |
| H | ALA46 |
| H | LYS48 |
| H | ASP67 |
| H | ALA90 |
| H | ARG133 |
| H | HIS176 |
| H | SER179 |
| H | GLY180 |
| H | GLY215 |
| H | GLY216 |
| H | GLU252 |
| H | GLY254 |
| H | ARG255 |
| H | TYR353 |
| H | HOH2014 |
| H | HOH2025 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| F | LYS48 | |
| F | LYS148 |
| site_id | CSA10 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| B | LYS48 | |
| B | GLU252 | |
| B | HIS176 |
| site_id | CSA11 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| C | LYS48 | |
| C | GLU252 | |
| C | HIS176 |
| site_id | CSA12 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| D | LYS48 | |
| D | GLU252 | |
| D | HIS176 |
| site_id | CSA13 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| E | LYS48 | |
| E | GLU252 | |
| E | HIS176 |
| site_id | CSA14 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| F | LYS48 | |
| F | GLU252 | |
| F | HIS176 |
| site_id | CSA15 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| G | LYS48 | |
| G | GLU252 | |
| G | HIS176 |
| site_id | CSA16 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| H | LYS48 | |
| H | GLU252 | |
| H | HIS176 |
| site_id | CSA2 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| A | LYS48 | |
| A | LYS148 |
| site_id | CSA3 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| E | LYS48 | |
| E | LYS148 |
| site_id | CSA4 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| B | LYS48 | |
| B | LYS148 |
| site_id | CSA5 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| H | LYS48 | |
| H | LYS148 |
| site_id | CSA6 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| C | LYS48 | |
| C | LYS148 |
| site_id | CSA7 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| D | LYS48 | |
| D | LYS148 |
| site_id | CSA8 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| G | LYS48 | |
| G | LYS148 |
| site_id | CSA9 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1bd0 |
| Chain | Residue | Details |
| A | LYS48 | |
| A | GLU252 | |
| A | HIS176 |
