2NV9
The X-ray Crystal Structure of the Paramecium bursaria Chlorella virus arginine decarboxylase
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0004586 | molecular_function | ornithine decarboxylase activity |
A | 0005737 | cellular_component | cytoplasm |
A | 0006596 | biological_process | polyamine biosynthetic process |
A | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
B | 0003824 | molecular_function | catalytic activity |
B | 0004586 | molecular_function | ornithine decarboxylase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006596 | biological_process | polyamine biosynthetic process |
B | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
C | 0003824 | molecular_function | catalytic activity |
C | 0004586 | molecular_function | ornithine decarboxylase activity |
C | 0005737 | cellular_component | cytoplasm |
C | 0006596 | biological_process | polyamine biosynthetic process |
C | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
D | 0003824 | molecular_function | catalytic activity |
D | 0004586 | molecular_function | ornithine decarboxylase activity |
D | 0005737 | cellular_component | cytoplasm |
D | 0006596 | biological_process | polyamine biosynthetic process |
D | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
E | 0003824 | molecular_function | catalytic activity |
E | 0004586 | molecular_function | ornithine decarboxylase activity |
E | 0005737 | cellular_component | cytoplasm |
E | 0006596 | biological_process | polyamine biosynthetic process |
E | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
F | 0003824 | molecular_function | catalytic activity |
F | 0004586 | molecular_function | ornithine decarboxylase activity |
F | 0005737 | cellular_component | cytoplasm |
F | 0006596 | biological_process | polyamine biosynthetic process |
F | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
G | 0003824 | molecular_function | catalytic activity |
G | 0004586 | molecular_function | ornithine decarboxylase activity |
G | 0005737 | cellular_component | cytoplasm |
G | 0006596 | biological_process | polyamine biosynthetic process |
G | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
H | 0003824 | molecular_function | catalytic activity |
H | 0004586 | molecular_function | ornithine decarboxylase activity |
H | 0005737 | cellular_component | cytoplasm |
H | 0006596 | biological_process | polyamine biosynthetic process |
H | 0033387 | biological_process | putrescine biosynthetic process from ornithine |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PLP A 2001 |
Chain | Residue |
A | LYS48 |
A | GLU252 |
A | GLY254 |
A | ARG255 |
A | TYR353 |
A | HOH2005 |
B | CYS324 |
A | ASP67 |
A | ALA90 |
A | ARG133 |
A | HIS176 |
A | SER179 |
A | GLY180 |
A | GLY215 |
A | GLY216 |
site_id | AC2 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP B 2002 |
Chain | Residue |
A | CYS324 |
B | ALA46 |
B | LYS48 |
B | ASP67 |
B | ALA90 |
B | ARG133 |
B | HIS176 |
B | SER179 |
B | GLY180 |
B | GLY215 |
B | GLY216 |
B | GLU252 |
B | GLY254 |
B | ARG255 |
B | TYR353 |
B | HOH2013 |
B | HOH2017 |
site_id | AC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP C 2003 |
Chain | Residue |
C | ALA46 |
C | LYS48 |
C | ASP67 |
C | ARG133 |
C | HIS176 |
C | SER179 |
C | GLY180 |
C | GLY215 |
C | GLY216 |
C | GLU252 |
C | PRO253 |
C | GLY254 |
C | ARG255 |
C | TYR353 |
C | HOH2006 |
C | HOH2022 |
D | CYS324 |
site_id | AC4 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP D 2004 |
Chain | Residue |
C | CYS324 |
D | ALA46 |
D | LYS48 |
D | ASP67 |
D | ALA90 |
D | ARG133 |
D | HIS176 |
D | SER179 |
D | GLY180 |
D | GLY215 |
D | GLY216 |
D | GLU252 |
D | GLY254 |
D | ARG255 |
D | TYR353 |
D | HOH2010 |
D | HOH2035 |
site_id | AC5 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP E 2005 |
Chain | Residue |
E | ALA46 |
E | LYS48 |
E | ASP67 |
E | ALA90 |
E | ARG133 |
E | HIS176 |
E | SER179 |
E | GLY180 |
E | GLY215 |
E | GLY216 |
E | GLU252 |
E | GLY254 |
E | ARG255 |
E | TYR353 |
E | HOH2020 |
E | HOH2048 |
F | CYS324 |
site_id | AC6 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PLP F 2006 |
Chain | Residue |
E | CYS324 |
F | ALA46 |
F | LYS48 |
F | ASP67 |
F | ARG133 |
F | HIS176 |
F | SER179 |
F | GLY215 |
F | GLY216 |
F | GLU252 |
F | GLY254 |
F | ARG255 |
F | TYR353 |
F | HOH2009 |
F | HOH2034 |
F | HOH2114 |
site_id | AC7 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PLP G 2007 |
Chain | Residue |
G | LYS48 |
G | ASP67 |
G | ALA90 |
G | ARG133 |
G | HIS176 |
G | SER179 |
G | GLY215 |
G | GLY216 |
G | GLU252 |
G | GLY254 |
G | ARG255 |
G | TYR353 |
G | HOH2009 |
G | HOH2019 |
H | CYS324 |
site_id | AC8 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PLP H 2008 |
Chain | Residue |
G | CYS324 |
H | ALA46 |
H | LYS48 |
H | ASP67 |
H | ALA90 |
H | ARG133 |
H | HIS176 |
H | SER179 |
H | GLY180 |
H | GLY215 |
H | GLY216 |
H | GLU252 |
H | GLY254 |
H | ARG255 |
H | TYR353 |
H | HOH2014 |
H | HOH2025 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
F | LYS48 | |
F | LYS148 |
site_id | CSA10 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
B | LYS48 | |
B | GLU252 | |
B | HIS176 |
site_id | CSA11 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
C | LYS48 | |
C | GLU252 | |
C | HIS176 |
site_id | CSA12 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
D | LYS48 | |
D | GLU252 | |
D | HIS176 |
site_id | CSA13 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
E | LYS48 | |
E | GLU252 | |
E | HIS176 |
site_id | CSA14 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
F | LYS48 | |
F | GLU252 | |
F | HIS176 |
site_id | CSA15 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
G | LYS48 | |
G | GLU252 | |
G | HIS176 |
site_id | CSA16 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
H | LYS48 | |
H | GLU252 | |
H | HIS176 |
site_id | CSA2 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
A | LYS48 | |
A | LYS148 |
site_id | CSA3 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
E | LYS48 | |
E | LYS148 |
site_id | CSA4 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
B | LYS48 | |
B | LYS148 |
site_id | CSA5 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
H | LYS48 | |
H | LYS148 |
site_id | CSA6 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
C | LYS48 | |
C | LYS148 |
site_id | CSA7 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
D | LYS48 | |
D | LYS148 |
site_id | CSA8 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
G | LYS48 | |
G | LYS148 |
site_id | CSA9 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1bd0 |
Chain | Residue | Details |
A | LYS48 | |
A | GLU252 | |
A | HIS176 |