Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003906 | molecular_function | DNA-(apurinic or apyrimidinic site) endonuclease activity |
A | 0004519 | molecular_function | endonuclease activity |
A | 0005829 | cellular_component | cytosol |
A | 0006281 | biological_process | DNA repair |
A | 0006284 | biological_process | base-excision repair |
A | 0008081 | molecular_function | phosphoric diester hydrolase activity |
A | 0008270 | molecular_function | zinc ion binding |
A | 0008296 | molecular_function | 3'-5'-DNA exonuclease activity |
A | 0008833 | molecular_function | deoxyribonuclease IV (phage-T4-induced) activity |
A | 0016791 | molecular_function | phosphatase activity |
A | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN A 401 |
Chain | Residue |
A | HIS69 |
A | HIS109 |
A | GLU145 |
A | ZN402 |
C | 3DR307 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ZN A 402 |
Chain | Residue |
A | ZN401 |
C | 3DR307 |
A | GLU145 |
A | ASP179 |
A | HIS216 |
A | GLU261 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE ZN A 403 |
Chain | Residue |
A | HIS182 |
A | ASP229 |
A | HIS231 |
B | DT306 |
C | 3DR307 |
Functional Information from PROSITE/UniProt
site_id | PS00730 |
Number of Residues | 8 |
Details | AP_NUCLEASE_F2_2 AP endonucleases family 2 signature 2. GVCIDTCH |
Chain | Residue | Details |
A | GLY175-HIS182 | |
site_id | PS00731 |
Number of Residues | 17 |
Details | AP_NUCLEASE_F2_3 AP endonucleases family 2 signature 3. MHlNDAkstfGsrvDrH |
Chain | Residue | Details |
A | MET215-HIS231 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 9 |
Details | BINDING: |
Chain | Residue | Details |
A | HIS69 | |
A | HIS109 | |
A | GLU145 | |
A | ASP179 | |
A | HIS182 | |
A | HIS216 | |
A | ASP229 | |
A | HIS231 | |
A | GLU261 | |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1qum |
Chain | Residue | Details |
A | GLU261 | |
site_id | MCSA1 |
Number of Residues | 11 |
Details | M-CSA 11 |
Chain | Residue | Details |
A | ARG37 | transition state stabiliser |
A | HIS231 | metal ligand |
A | GLU261 | metal ligand |
A | HIS69 | metal ligand |
A | ALA72 | transition state stabiliser |
A | HIS109 | metal ligand |
A | GLU145 | metal ligand |
A | ASP179 | metal ligand |
A | HIS182 | metal ligand |
A | HIS216 | metal ligand |
A | ASP229 | metal ligand |