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2MIP

CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS (HIV) TYPE 2 PROTEASE IN COMPLEX WITH A REDUCED AMIDE INHIBITOR AND COMPARISON WITH HIV-1 PROTEASE STRUCTURES

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
D0004190molecular_functionaspartic-type endopeptidase activity
D0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues29
DetailsBINDING SITE FOR CHAIN E OF INHIBITOR BI-LA-398
ChainResidue
AASP25
AILE50
APRO81
AILE82
AILE84
BARG8
BASP25
BGLY27
BASP29
BGLY48
BGLY49
AGLY27
BILE50
DTYR14
EHOH501
GPHE1
GVAL2
GPHE3
GLEU4
GGLU5
GILE6
GNH27
AALA28
AASP29
AASP30
AILE32
AVAL47
AGLY48
AGLY49

site_idAC2
Number of Residues31
DetailsBINDING SITE FOR CHAIN F OF INHIBITOR BI-LA-398
ChainResidue
BASN40
BASN41
BGLU65
CLEU23
CASP25
CGLY27
CALA28
CASP29
CGLY48
CGLY49
CILE50
CILE82
CILE84
DASP25
DGLY27
DALA28
DASP29
DASP30
DVAL47
DGLY48
DGLY49
DPRO81
DILE82
FHOH701
HPHE1
HVAL2
HPHE3
HLEU4
HGLU5
HILE6
HNH27

site_idAC3
Number of Residues28
DetailsBINDING SITE FOR CHAIN G OF INHIBITOR BI-LA-398
ChainResidue
AASP25
AGLY27
AALA28
AASP29
AASP30
AGLY48
AGLY49
AILE50
APRO81
AILE84
BARG8
BASP25
BGLY27
BALA28
BASP29
BASP30
BVAL47
BGLY48
BILE50
BHOH505
EPHE1
EVAL2
EPHE3
ELEU4
EGLU5
EILE6
ENH27
EHOH501

site_idAC4
Number of Residues32
DetailsBINDING SITE FOR CHAIN H OF INHIBITOR BI-LA-398
ChainResidue
CGLY49
CILE50
CILE82
DASP25
DGLY27
DALA28
DASP29
DVAL47
DGLY48
DGLY49
DILE50
DPRO81
DILE82
FPHE1
FVAL2
FPHE3
FLEU4
FGLU5
FILE6
FNH27
FHOH701
BTYR14
BASN40
BASN41
BTYR42
CASP25
CGLY27
CALA28
CASP29
CASP30
CVAL47
CGLY48

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. VLLDTGADDSIV
ChainResidueDetails
AVAL22-VAL33

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
AILE50
BILE50
CILE50
DILE50

site_idSWS_FT_FI2
Number of Residues4
DetailsMOD_RES: Phosphotyrosine; by host => ECO:0000250
ChainResidueDetails
AILE50
BILE50
CILE50
DILE50

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
ATHR26
BASP25
BTHR26

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
DASP25
DTHR26
CASP25
CTHR26

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
AASP25
BASP25

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a30
ChainResidueDetails
CASP25
DASP25

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PDB entries from 2024-09-18

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