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2JRI

Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004843molecular_functioncysteine-type deubiquitinase activity
A0016579biological_processprotein deubiquitination
Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
BLYS209-ASP234

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues179
DetailsDomain: {"description":"Josephin","evidences":[{"source":"PROSITE-ProRule","id":"PRU00331","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"23625928","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"33157014","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"16020535","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"16118278","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsActive site: {"evidences":[{"source":"PubMed","id":"16020535","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"16118278","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsCross-link: {"description":"Peptide (Met-Gly) (interchain with G-Cter in ubiquitin)","evidences":[{"source":"PubMed","id":"23696636","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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