Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

2IY4

X-ray structure of Dps from Listeria monocytogenes

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005737	cellular_component	cytoplasm
A	0006879	biological_process	intracellular iron ion homeostasis
A	0008199	molecular_function	ferric iron binding
A	0016491	molecular_function	oxidoreductase activity
A	0016722	molecular_function	oxidoreductase activity, acting on metal ions
A	0046872	molecular_function	metal ion binding
B	0005737	cellular_component	cytoplasm
B	0006879	biological_process	intracellular iron ion homeostasis
B	0008199	molecular_function	ferric iron binding
B	0016491	molecular_function	oxidoreductase activity
B	0016722	molecular_function	oxidoreductase activity, acting on metal ions
B	0046872	molecular_function	metal ion binding
C	0005737	cellular_component	cytoplasm
C	0006879	biological_process	intracellular iron ion homeostasis
C	0008199	molecular_function	ferric iron binding
C	0016491	molecular_function	oxidoreductase activity
C	0016722	molecular_function	oxidoreductase activity, acting on metal ions
C	0046872	molecular_function	metal ion binding
D	0005737	cellular_component	cytoplasm
D	0006879	biological_process	intracellular iron ion homeostasis
D	0008199	molecular_function	ferric iron binding
D	0016491	molecular_function	oxidoreductase activity
D	0016722	molecular_function	oxidoreductase activity, acting on metal ions
D	0046872	molecular_function	metal ion binding
E	0005737	cellular_component	cytoplasm
E	0006879	biological_process	intracellular iron ion homeostasis
E	0008199	molecular_function	ferric iron binding
E	0016491	molecular_function	oxidoreductase activity
E	0016722	molecular_function	oxidoreductase activity, acting on metal ions
E	0046872	molecular_function	metal ion binding
F	0005737	cellular_component	cytoplasm
F	0006879	biological_process	intracellular iron ion homeostasis
F	0008199	molecular_function	ferric iron binding
F	0016491	molecular_function	oxidoreductase activity
F	0016722	molecular_function	oxidoreductase activity, acting on metal ions
F	0046872	molecular_function	metal ion binding
G	0005737	cellular_component	cytoplasm
G	0006879	biological_process	intracellular iron ion homeostasis
G	0008199	molecular_function	ferric iron binding
G	0016491	molecular_function	oxidoreductase activity
G	0016722	molecular_function	oxidoreductase activity, acting on metal ions
G	0046872	molecular_function	metal ion binding
H	0005737	cellular_component	cytoplasm
H	0006879	biological_process	intracellular iron ion homeostasis
H	0008199	molecular_function	ferric iron binding
H	0016491	molecular_function	oxidoreductase activity
H	0016722	molecular_function	oxidoreductase activity, acting on metal ions
H	0046872	molecular_function	metal ion binding
I	0005737	cellular_component	cytoplasm
I	0006879	biological_process	intracellular iron ion homeostasis
I	0008199	molecular_function	ferric iron binding
I	0016491	molecular_function	oxidoreductase activity
I	0016722	molecular_function	oxidoreductase activity, acting on metal ions
I	0046872	molecular_function	metal ion binding
J	0005737	cellular_component	cytoplasm
J	0006879	biological_process	intracellular iron ion homeostasis
J	0008199	molecular_function	ferric iron binding
J	0016491	molecular_function	oxidoreductase activity
J	0016722	molecular_function	oxidoreductase activity, acting on metal ions
J	0046872	molecular_function	metal ion binding
K	0005737	cellular_component	cytoplasm
K	0006879	biological_process	intracellular iron ion homeostasis
K	0008199	molecular_function	ferric iron binding
K	0016491	molecular_function	oxidoreductase activity
K	0016722	molecular_function	oxidoreductase activity, acting on metal ions
K	0046872	molecular_function	metal ion binding
L	0005737	cellular_component	cytoplasm
L	0006879	biological_process	intracellular iron ion homeostasis
L	0008199	molecular_function	ferric iron binding
L	0016491	molecular_function	oxidoreductase activity
L	0016722	molecular_function	oxidoreductase activity, acting on metal ions
L	0046872	molecular_function	metal ion binding
M	0005737	cellular_component	cytoplasm
M	0006879	biological_process	intracellular iron ion homeostasis
M	0008199	molecular_function	ferric iron binding
M	0016491	molecular_function	oxidoreductase activity
M	0016722	molecular_function	oxidoreductase activity, acting on metal ions
M	0046872	molecular_function	metal ion binding
N	0005737	cellular_component	cytoplasm
N	0006879	biological_process	intracellular iron ion homeostasis
N	0008199	molecular_function	ferric iron binding
N	0016491	molecular_function	oxidoreductase activity
N	0016722	molecular_function	oxidoreductase activity, acting on metal ions
N	0046872	molecular_function	metal ion binding
O	0005737	cellular_component	cytoplasm
O	0006879	biological_process	intracellular iron ion homeostasis
O	0008199	molecular_function	ferric iron binding
O	0016491	molecular_function	oxidoreductase activity
O	0016722	molecular_function	oxidoreductase activity, acting on metal ions
O	0046872	molecular_function	metal ion binding
P	0005737	cellular_component	cytoplasm
P	0006879	biological_process	intracellular iron ion homeostasis
P	0008199	molecular_function	ferric iron binding
P	0016491	molecular_function	oxidoreductase activity
P	0016722	molecular_function	oxidoreductase activity, acting on metal ions
P	0046872	molecular_function	metal ion binding
Q	0005737	cellular_component	cytoplasm
Q	0006879	biological_process	intracellular iron ion homeostasis
Q	0008199	molecular_function	ferric iron binding
Q	0016491	molecular_function	oxidoreductase activity
Q	0016722	molecular_function	oxidoreductase activity, acting on metal ions
Q	0046872	molecular_function	metal ion binding
R	0005737	cellular_component	cytoplasm
R	0006879	biological_process	intracellular iron ion homeostasis
R	0008199	molecular_function	ferric iron binding
R	0016491	molecular_function	oxidoreductase activity
R	0016722	molecular_function	oxidoreductase activity, acting on metal ions
R	0046872	molecular_function	metal ion binding
S	0005737	cellular_component	cytoplasm
S	0006879	biological_process	intracellular iron ion homeostasis
S	0008199	molecular_function	ferric iron binding
S	0016491	molecular_function	oxidoreductase activity
S	0016722	molecular_function	oxidoreductase activity, acting on metal ions
S	0046872	molecular_function	metal ion binding
T	0005737	cellular_component	cytoplasm
T	0006879	biological_process	intracellular iron ion homeostasis
T	0008199	molecular_function	ferric iron binding
T	0016491	molecular_function	oxidoreductase activity
T	0016722	molecular_function	oxidoreductase activity, acting on metal ions
T	0046872	molecular_function	metal ion binding
U	0005737	cellular_component	cytoplasm
U	0006879	biological_process	intracellular iron ion homeostasis
U	0008199	molecular_function	ferric iron binding
U	0016491	molecular_function	oxidoreductase activity
U	0016722	molecular_function	oxidoreductase activity, acting on metal ions
U	0046872	molecular_function	metal ion binding
V	0005737	cellular_component	cytoplasm
V	0006879	biological_process	intracellular iron ion homeostasis
V	0008199	molecular_function	ferric iron binding
V	0016491	molecular_function	oxidoreductase activity
V	0016722	molecular_function	oxidoreductase activity, acting on metal ions
V	0046872	molecular_function	metal ion binding
X	0005737	cellular_component	cytoplasm
X	0006879	biological_process	intracellular iron ion homeostasis
X	0008199	molecular_function	ferric iron binding
X	0016491	molecular_function	oxidoreductase activity
X	0016722	molecular_function	oxidoreductase activity, acting on metal ions
X	0046872	molecular_function	metal ion binding
Y	0005737	cellular_component	cytoplasm
Y	0006879	biological_process	intracellular iron ion homeostasis
Y	0008199	molecular_function	ferric iron binding
Y	0016491	molecular_function	oxidoreductase activity
Y	0016722	molecular_function	oxidoreductase activity, acting on metal ions
Y	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE B1157

Chain	Residue
B	ASP58
B	GLU62
D	HIS31

site_id	AC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE C1157

Chain	Residue
A	HIS31
C	ASP58
C	GLU62

site_id	AC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE D1157

Chain	Residue
B	HIS31
D	ASP58
D	GLU62

site_id	AC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE E1157

Chain	Residue
E	ASP58
E	GLU62
G	HIS31
G	ASP47

site_id	AC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE E1158

Chain	Residue
E	HIS31
E	ASP47
G	ASP58
G	GLU62

site_id	AC6
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE F1157

Chain	Residue
F	ASP58
F	GLU62
F	HOH2036
H	HIS31

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE H1157

Chain	Residue
F	HIS31
H	ASP58
H	GLU62

site_id	AC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE I1157

Chain	Residue
I	ASP58
I	GLU62
K	HIS31

site_id	AC9
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE J1157

Chain	Residue
J	ASP58
J	GLU62
L	HIS31

site_id	BC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE K1157

Chain	Residue
I	HIS31
K	ASP58
K	GLU62

site_id	BC2
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE L1157

Chain	Residue
J	HIS31
L	ASP58
L	GLU62

site_id	BC3
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE M1157

Chain	Residue
M	HIS31
M	ASP47
M	HOH2021
O	ASP58
O	GLU62

site_id	BC4
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE M1158

Chain	Residue
M	ASP58
M	GLU62
O	HIS31

site_id	BC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE N1157

Chain	Residue
N	ASP58
N	GLU62
P	HIS31

site_id	BC6
Number of Residues	2
Details	BINDING SITE FOR RESIDUE FE N1158

Chain	Residue
N	GLU59
N	ARG63

site_id	BC7
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE P1157

Chain	Residue
N	HIS31
P	ASP58
P	GLU62
P	HOH2029

site_id	BC8
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE Q1157

Chain	Residue
Q	HIS31
S	ASP58
S	GLU62

site_id	BC9
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE R1157

Chain	Residue
R	ASP58
R	GLU62
T	HIS31
T	ASP47

site_id	CC1
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE R1158

Chain	Residue
R	HIS31
T	ASP58
T	GLU62

site_id	CC2
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE S1157

Chain	Residue
N	ARG63
N	HOH2028
S	ALA137
S	ASP140

site_id	CC3
Number of Residues	3
Details	BINDING SITE FOR RESIDUE FE U1157

Chain	Residue
U	ASP58
U	GLU62
X	HIS31

site_id	CC4
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE V1157

Chain	Residue
V	ASP58
V	GLU62
Y	HIS31
Y	ASP47

site_id	CC5
Number of Residues	4
Details	BINDING SITE FOR RESIDUE FE X1157

Chain	Residue
U	HIS31
X	ASP58
X	GLU62
X	HOH2034

site_id	CC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE FE Y1157

Chain	Residue
V	HIS31
V	ASP47
V	HOH2023
Y	ASP58
Y	GLU62

Functional Information from PROSITE/UniProt

site_id	PS00818
Number of Residues	17
Details	DPS_1 Dps protein family signature 1. HWyMrGhnfftLHekmD

Chain	Residue	Details
A	HIS31-ASP47

site_id	PS00819
Number of Residues	15
Details	DPS_2 Dps protein family signature 2. MDeVAERllaIGgsP

Chain	Residue	Details
A	MET57-PRO71

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	48
Details	BINDING: BINDING => ECO:0000250

Chain	Residue	Details
A	HIS31
M	HIS31
M	GLU62
N	HIS31
N	GLU62
O	HIS31
O	GLU62
P	HIS31
P	GLU62
Q	HIS31
Q	GLU62
R	HIS31
R	GLU62
S	HIS31
S	GLU62
T	HIS31
T	GLU62
U	HIS31
U	GLU62
V	HIS31
V	GLU62
X	HIS31
X	GLU62
Y	HIS31
Y	GLU62
A	GLU62
B	HIS31
B	GLU62
C	HIS31
C	GLU62
D	HIS31
D	GLU62
E	HIS31
E	GLU62
F	HIS31
F	GLU62
G	HIS31
G	GLU62
H	HIS31
H	GLU62
I	HIS31
I	GLU62
J	HIS31
J	GLU62
K	HIS31
K	GLU62
L	HIS31
L	GLU62

site_id	SWS_FT_FI2
Number of Residues	24
Details	BINDING: in other chain => ECO:0000250

Chain	Residue	Details
A	ASP58
B	ASP58
C	ASP58
D	ASP58
E	ASP58
F	ASP58
G	ASP58
H	ASP58
I	ASP58
J	ASP58
K	ASP58
L	ASP58
M	ASP58
N	ASP58
O	ASP58
P	ASP58
Q	ASP58
R	ASP58
S	ASP58
T	ASP58
U	ASP58
V	ASP58
X	ASP58
Y	ASP58

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)