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2IA5

T4 polynucleotide kinase/phosphatase with bound sulfate and magnesium.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
A0016787molecular_functionhydrolase activity
A0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
A0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
A0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0006281biological_processDNA repair
B0006974biological_processDNA damage response
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0016740molecular_functiontransferase activity
B0016787molecular_functionhydrolase activity
B0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
B0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
B0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
C0000166molecular_functionnucleotide binding
C0005524molecular_functionATP binding
C0006281biological_processDNA repair
C0006974biological_processDNA damage response
C0016301molecular_functionkinase activity
C0016310biological_processphosphorylation
C0016740molecular_functiontransferase activity
C0016787molecular_functionhydrolase activity
C0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
C0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
C0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
D0000166molecular_functionnucleotide binding
D0005524molecular_functionATP binding
D0006281biological_processDNA repair
D0006974biological_processDNA damage response
D0016301molecular_functionkinase activity
D0016310biological_processphosphorylation
D0016740molecular_functiontransferase activity
D0016787molecular_functionhydrolase activity
D0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
D0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
D0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
E0000166molecular_functionnucleotide binding
E0005524molecular_functionATP binding
E0006281biological_processDNA repair
E0006974biological_processDNA damage response
E0016301molecular_functionkinase activity
E0016310biological_processphosphorylation
E0016740molecular_functiontransferase activity
E0016787molecular_functionhydrolase activity
E0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
E0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
E0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
F0000166molecular_functionnucleotide binding
F0005524molecular_functionATP binding
F0006281biological_processDNA repair
F0006974biological_processDNA damage response
F0016301molecular_functionkinase activity
F0016310biological_processphosphorylation
F0016740molecular_functiontransferase activity
F0016787molecular_functionhydrolase activity
F0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
F0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
F0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
G0000166molecular_functionnucleotide binding
G0005524molecular_functionATP binding
G0006281biological_processDNA repair
G0006974biological_processDNA damage response
G0016301molecular_functionkinase activity
G0016310biological_processphosphorylation
G0016740molecular_functiontransferase activity
G0016787molecular_functionhydrolase activity
G0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
G0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
G0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
H0000166molecular_functionnucleotide binding
H0005524molecular_functionATP binding
H0006281biological_processDNA repair
H0006974biological_processDNA damage response
H0016301molecular_functionkinase activity
H0016310biological_processphosphorylation
H0016740molecular_functiontransferase activity
H0016787molecular_functionhydrolase activity
H0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
H0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
H0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
I0000166molecular_functionnucleotide binding
I0005524molecular_functionATP binding
I0006281biological_processDNA repair
I0006974biological_processDNA damage response
I0016301molecular_functionkinase activity
I0016310biological_processphosphorylation
I0016740molecular_functiontransferase activity
I0016787molecular_functionhydrolase activity
I0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
I0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
I0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
J0000166molecular_functionnucleotide binding
J0005524molecular_functionATP binding
J0006281biological_processDNA repair
J0006974biological_processDNA damage response
J0016301molecular_functionkinase activity
J0016310biological_processphosphorylation
J0016740molecular_functiontransferase activity
J0016787molecular_functionhydrolase activity
J0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
J0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
J0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
K0000166molecular_functionnucleotide binding
K0005524molecular_functionATP binding
K0006281biological_processDNA repair
K0006974biological_processDNA damage response
K0016301molecular_functionkinase activity
K0016310biological_processphosphorylation
K0016740molecular_functiontransferase activity
K0016787molecular_functionhydrolase activity
K0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
K0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
K0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
L0000166molecular_functionnucleotide binding
L0005524molecular_functionATP binding
L0006281biological_processDNA repair
L0006974biological_processDNA damage response
L0016301molecular_functionkinase activity
L0016310biological_processphosphorylation
L0016740molecular_functiontransferase activity
L0016787molecular_functionhydrolase activity
L0046404molecular_functionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
L0047846molecular_functiondeoxynucleotide 3'-phosphatase activity
L0051734molecular_functionATP-dependent polynucleotide 5'-hydroxyl-kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 901
ChainResidue
AASP165
AASP167
ATHR169
AASP277
AASP278

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 902
ChainResidue
BARG279
BASP165
BASP167
BASP277
BASP278

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG C 903
ChainResidue
CASP165
CASP167

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG D 904
ChainResidue
DASP165
DASP167
DGLY168
DTHR169
DASP278

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG E 905
ChainResidue
EASP165
EASP167

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG H 906
ChainResidue
HASP165
HASP167
HASP277

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG J 907
ChainResidue
JASP167
JGLY168
JTHR169
JASP278

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 911
ChainResidue
AGLY12
ASER13
AGLY14
ALYS15
ASER16
AARG126
AHOH2040

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 912
ChainResidue
AARG38
ATHR86
AMET139
AHOH2080
AHOH2084

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 913
ChainResidue
ALYS253
AASP254
AARG279
AGLN281

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 914
ChainResidue
BPRO11
BGLY12
BSER13
BGLY14
BLYS15
BSER16
BARG126

site_idBC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 915
ChainResidue
BARG34
BARG38
BTHR86
BHOH2094
BHOH2677

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 916
ChainResidue
BARG246
BLYS253
BASP254
BARG279
BGLN281
BHOH2962

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 C 917
ChainResidue
CGLY12
CSER13
CGLY14
CLYS15
CSER16
CARG126

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 C 918
ChainResidue
CARG34
CARG38
CASP85
CTHR86
CMET139
CHOH2011
CHOH2017

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 C 919
ChainResidue
CLYS253
CASP254
CARG279
CHOH2394

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 D 920
ChainResidue
DCYS10
DGLY12
DSER13
DGLY14
DLYS15
DSER16
DARG126

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 921
ChainResidue
DARG34
DARG38
DASP85
DTHR86

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 D 922
ChainResidue
DLYS253
DASP254
DARG279
DGLN281
DHOH2755

site_idCC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 E 923
ChainResidue
EGLY12
ESER13
EGLY14
ELYS15
ESER16
EARG126

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 E 924
ChainResidue
EARG34
EARG38
EASP85
ETHR86
EMET139
EHOH2280

site_idCC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 E 925
ChainResidue
EARG246
ELYS253
EASP254
EARG279
EGLN281

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 F 926
ChainResidue
FGLY12
FSER13
FGLY14
FLYS15
FSER16
FARG126

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 F 927
ChainResidue
FARG38
FASP85
FTHR86
FMET139
FHOH2230

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 F 928
ChainResidue
FLYS253
FASP254
FARG279
FHOH2602

site_idCC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 G 929
ChainResidue
GPRO11
GGLY12
GSER13
GGLY14
GLYS15
GSER16
GARG126
GHOH2736

site_idCC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 G 930
ChainResidue
GARG34
GARG38
GASP85
GTHR86
GHOH2140

site_idDC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 G 931
ChainResidue
GARG246
GLYS253
GASP254
GARG279
GHOH2794
GHOH2812

site_idDC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 H 932
ChainResidue
HCYS10
HGLY12
HSER13
HGLY14
HLYS15
HSER16
HARG126

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 H 933
ChainResidue
HARG34
HARG38
HTHR86
HHOH2348

site_idDC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 H 934
ChainResidue
HARG246
HLYS253
HASP254
HARG279

site_idDC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 I 935
ChainResidue
IGLY12
ISER13
IGLY14
ILYS15
ISER16
IARG126

site_idDC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 I 936
ChainResidue
IARG34
IARG38
IASP85
ITHR86
IMET139
IHOH2479
IHOH2520

site_idDC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 I 937
ChainResidue
IARG246
ILYS253
IASP254
IARG279
IGLN281

site_idDC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 J 938
ChainResidue
JCYS10
JGLY12
JSER13
JGLY14
JLYS15
JSER16
JARG126

site_idDC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 J 939
ChainResidue
JARG38
JASP85
JTHR86

site_idEC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 J 940
ChainResidue
JLYS253
JASP254
JARG279
JGLN281
JHOH2076

site_idEC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 K 941
ChainResidue
KCYS10
KGLY12
KSER13
KGLY14
KLYS15
KSER16
KARG126
KHOH2342

site_idEC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 K 942
ChainResidue
KARG34
KARG38
KASP85
KTHR86
KHOH2099

site_idEC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 K 943
ChainResidue
KARG252
KLYS253
KASP254
KARG279
KGLN281

site_idEC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 L 944
ChainResidue
LCYS10
LGLY12
LSER13
LGLY14
LLYS15
LSER16
LARG126

site_idEC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 L 945
ChainResidue
LARG34
LARG38
LASP85
LTHR86
LMET139

site_idEC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 L 946
ChainResidue
LLYS253
LASP254
LARG279

site_idEC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS A 951
ChainResidue
ACYS184
ATRP231

site_idEC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ARS B 952
ChainResidue
BTRP231

site_idFC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS C 953
ChainResidue
CCYS184
CHOH2659

site_idFC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS D 954
ChainResidue
DCYS184
DHOH2585

site_idFC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS E 955
ChainResidue
ECYS184
ETRP231

site_idFC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS F 956
ChainResidue
FTYR179
FCYS184

site_idFC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ARS H 958
ChainResidue
HTRP231

site_idFC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS I 959
ChainResidue
ITRP231
IHOH2897

site_idFC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ARS K 961
ChainResidue
KCYS184
KTRP231

Catalytic Information from CSA
site_idMCSA1
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
ALYS15electrostatic stabiliser
AASP35proton shuttle (general acid/base)
AARG126electrostatic stabiliser
AASP165covalent catalysis

site_idMCSA2
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
BLYS15electrostatic stabiliser
BASP35proton shuttle (general acid/base)
BARG126electrostatic stabiliser
BASP165covalent catalysis

site_idMCSA3
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
CLYS15electrostatic stabiliser
CASP35proton shuttle (general acid/base)
CARG126electrostatic stabiliser
CASP165covalent catalysis

site_idMCSA4
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
DLYS15electrostatic stabiliser
DASP35proton shuttle (general acid/base)
DARG126electrostatic stabiliser
DASP165covalent catalysis

site_idMCSA5
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
ELYS15electrostatic stabiliser
EASP35proton shuttle (general acid/base)
EARG126electrostatic stabiliser
EASP165covalent catalysis

site_idMCSA6
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
FLYS15electrostatic stabiliser
FASP35proton shuttle (general acid/base)
FARG126electrostatic stabiliser
FASP165covalent catalysis

site_idMCSA7
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
GLYS15electrostatic stabiliser
GASP35proton shuttle (general acid/base)
GARG126electrostatic stabiliser
GASP165covalent catalysis

site_idMCSA8
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
HLYS15electrostatic stabiliser
HASP35proton shuttle (general acid/base)
HARG126electrostatic stabiliser
HASP165covalent catalysis

site_idMCSA9
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
ILYS15electrostatic stabiliser
IASP35proton shuttle (general acid/base)
IARG126electrostatic stabiliser
IASP165covalent catalysis

site_idMCSA10
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
JLYS15electrostatic stabiliser
JASP35proton shuttle (general acid/base)
JARG126electrostatic stabiliser
JASP165covalent catalysis

site_idMCSA11
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
KLYS15electrostatic stabiliser
KASP35proton shuttle (general acid/base)
KARG126electrostatic stabiliser
KASP165covalent catalysis

site_idMCSA12
Number of Residues4
DetailsM-CSA 625
ChainResidueDetails
LLYS15electrostatic stabiliser
LASP35proton shuttle (general acid/base)
LARG126electrostatic stabiliser
LASP165covalent catalysis

218853

PDB entries from 2024-04-24

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