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2I1W

Crystal structure of NAD kinase 1 from Listeria monocytogenes

Functional Information from GO Data
ChainGOidnamespacecontents
A0003951molecular_functionNAD+ kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006741biological_processNADP biosynthetic process
A0016301molecular_functionkinase activity
A0019674biological_processNAD metabolic process
A0046872molecular_functionmetal ion binding
A0051287molecular_functionNAD binding
B0003951molecular_functionNAD+ kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006741biological_processNADP biosynthetic process
B0016301molecular_functionkinase activity
B0019674biological_processNAD metabolic process
B0046872molecular_functionmetal ion binding
B0051287molecular_functionNAD binding
C0003951molecular_functionNAD+ kinase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006741biological_processNADP biosynthetic process
C0016301molecular_functionkinase activity
C0019674biological_processNAD metabolic process
C0046872molecular_functionmetal ion binding
C0051287molecular_functionNAD binding
D0003951molecular_functionNAD+ kinase activity
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0006741biological_processNADP biosynthetic process
D0016301molecular_functionkinase activity
D0019674biological_processNAD metabolic process
D0046872molecular_functionmetal ion binding
D0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 501
ChainResidue
AARG247

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 502
ChainResidue
APHE253
BHIS205

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 513
ChainResidue
ATHR6

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 533
ChainResidue
AVAL98
AHOH610

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 534
ChainResidue
APHE251

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 530
ChainResidue
AHOH596

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 531
ChainResidue
AHOH535
ATHR117

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD A 532
ChainResidue
AGLU123
AASP222
AHIS223

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 508
ChainResidue
AHIS205
BPHE253

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 515
ChainResidue
BASN188
DLYS165

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD B 522
ChainResidue
BHIS258
BGLU263
BLEU265

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD B 528
ChainResidue
BGLU183
BGLY196

site_idBC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD B 535
ChainResidue
BPHE251

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD C 504
ChainResidue
CPHE253

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IOD C 523
ChainResidue
CGLU183
CGLY196
CSER197
CPRO198

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD D 506
ChainResidue
CASN140
DPHE253
DTRP254

site_idBC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD D 510
ChainResidue
DARG247

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00361, ECO:0000269|PubMed:17686780
ChainResidueDetails
AASP45
BASP45
CASP45
DASP45

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00361, ECO:0000269|PubMed:17686780
ChainResidueDetails
AASP45
BSER158
BTHR161
BHIS223
CASP45
CGLY46
CASN122
CSER158
CTHR161
CHIS223
DASP45
AGLY46
DGLY46
DASN122
DSER158
DTHR161
DHIS223
AASN122
ASER158
ATHR161
AHIS223
BASP45
BGLY46
BASN122

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00361
ChainResidueDetails
AARG148
BARG148
CARG148
DARG148

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000305|PubMed:17686780
ChainResidueDetails
AASP150
BASP150
CASP150
DASP150

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PDB entries from 2024-11-06

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