Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2HMA

The Crystal Structure of tRNA (5-Methylaminomethyl-2-Thiouridylate)-Methyltransferase TrmU from Streptococcus pneumoniae

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0002143biological_processtRNA wobble position uridine thiolation
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0016740molecular_functiontransferase activity
A0016783molecular_functionsulfurtransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 374
ChainResidue
ASER14
AGLY16
AASP18
ASER19
ASAM375
AHOH592

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE SAM A 375
ChainResidue
ASER19
AILE36
AMSE38
AASP100
AASN104
ALYS108
ATHR126
AGLY127
AHIS128
AGLN152
APHE155
AMG374
AHOH592
AGLY12
AMSE13
ASER14

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000250
ChainResidueDetails
ACYS103

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Cysteine persulfide intermediate => ECO:0000250
ChainResidueDetails
ACYS200

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING:
ChainResidueDetails
AGLY12
AMSE38
AGLY127

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Interaction with tRNA => ECO:0000250
ChainResidueDetails
AHIS128
AGLN344

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1kp2
ChainResidueDetails
AASP137
ALYS105

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon