Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000049 | molecular_function | tRNA binding |
A | 0000166 | molecular_function | nucleotide binding |
A | 0002143 | biological_process | tRNA wobble position uridine thiolation |
A | 0003723 | molecular_function | RNA binding |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0006400 | biological_process | tRNA modification |
A | 0008033 | biological_process | tRNA processing |
A | 0016740 | molecular_function | transferase activity |
A | 0016783 | molecular_function | sulfurtransferase activity |
A | 0103016 | molecular_function | tRNA-uridine 2-sulfurtransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 374 |
Chain | Residue |
A | SER14 |
A | GLY16 |
A | ASP18 |
A | SER19 |
A | SAM375 |
A | HOH592 |
site_id | AC2 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE SAM A 375 |
Chain | Residue |
A | SER19 |
A | ILE36 |
A | MSE38 |
A | ASP100 |
A | ASN104 |
A | LYS108 |
A | THR126 |
A | GLY127 |
A | HIS128 |
A | GLN152 |
A | PHE155 |
A | MG374 |
A | HOH592 |
A | GLY12 |
A | MSE13 |
A | SER14 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Region: {"description":"Interaction with target base in tRNA","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI2 |
Number of Residues | 12 |
Details | Region: {"description":"Interaction with tRNA","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | Active site: {"description":"Nucleophile","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | Active site: {"description":"Cysteine persulfide intermediate","evidences":[{"evidenceCode":"ECO:0000250"}]} |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Binding site: {} |
site_id | SWS_FT_FI6 |
Number of Residues | 1 |
Details | Site: {"description":"Interaction with tRNA","evidences":[{"evidenceCode":"ECO:0000250"}]} |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1kp2 |
Chain | Residue | Details |
A | ASP137 | |
A | LYS105 | |