2H8F
Crystal structure of deoxy hemoglobin from Trematomus bernacchii at pH 6.2
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004601 | molecular_function | peroxidase activity |
A | 0005344 | molecular_function | oxygen carrier activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0005833 | cellular_component | hemoglobin complex |
A | 0015671 | biological_process | oxygen transport |
A | 0019825 | molecular_function | oxygen binding |
A | 0020037 | molecular_function | heme binding |
A | 0031720 | molecular_function | haptoglobin binding |
A | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
A | 0042744 | biological_process | hydrogen peroxide catabolic process |
A | 0043177 | molecular_function | organic acid binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0072562 | cellular_component | blood microparticle |
A | 0098869 | biological_process | cellular oxidant detoxification |
B | 0005344 | molecular_function | oxygen carrier activity |
B | 0005833 | cellular_component | hemoglobin complex |
B | 0015671 | biological_process | oxygen transport |
B | 0019825 | molecular_function | oxygen binding |
B | 0020037 | molecular_function | heme binding |
B | 0046872 | molecular_function | metal ion binding |
C | 0004601 | molecular_function | peroxidase activity |
C | 0005344 | molecular_function | oxygen carrier activity |
C | 0005506 | molecular_function | iron ion binding |
C | 0005833 | cellular_component | hemoglobin complex |
C | 0015671 | biological_process | oxygen transport |
C | 0019825 | molecular_function | oxygen binding |
C | 0020037 | molecular_function | heme binding |
C | 0031720 | molecular_function | haptoglobin binding |
C | 0031838 | cellular_component | haptoglobin-hemoglobin complex |
C | 0042744 | biological_process | hydrogen peroxide catabolic process |
C | 0043177 | molecular_function | organic acid binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0072562 | cellular_component | blood microparticle |
C | 0098869 | biological_process | cellular oxidant detoxification |
D | 0005344 | molecular_function | oxygen carrier activity |
D | 0005833 | cellular_component | hemoglobin complex |
D | 0015671 | biological_process | oxygen transport |
D | 0019825 | molecular_function | oxygen binding |
D | 0020037 | molecular_function | heme binding |
D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE HEM A 200 |
Chain | Residue |
A | PHE43 |
A | LEU92 |
A | VAL94 |
A | ASN98 |
A | PHE99 |
A | LEU102 |
A | LEU137 |
A | HIS45 |
A | TRP46 |
A | HIS59 |
A | LYS62 |
A | VAL63 |
A | LEU84 |
A | GLN87 |
A | HIS88 |
site_id | AC2 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE HEM B 400 |
Chain | Residue |
B | THR38 |
B | HIS41 |
B | PHE42 |
B | HIS63 |
B | VAL67 |
B | LEU91 |
B | HIS92 |
B | LEU96 |
B | ASN102 |
B | PHE103 |
B | LEU141 |
B | HOH1370 |
site_id | AC3 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE HEM C 600 |
Chain | Residue |
C | TYR42 |
C | PHE43 |
C | HIS45 |
C | HIS59 |
C | LYS62 |
C | ILE67 |
C | LEU84 |
C | HIS88 |
C | LEU92 |
C | VAL94 |
C | ASN98 |
C | PHE99 |
C | LEU102 |
C | HOH1485 |
site_id | AC4 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE HEM D 800 |
Chain | Residue |
D | HIS63 |
D | LYS66 |
D | VAL67 |
D | LEU88 |
D | HIS92 |
D | LEU96 |
D | ASN102 |
D | PHE103 |
D | LEU106 |
D | LEU141 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: distal binding residue => ECO:0007744|PDB:1S5X, ECO:0007744|PDB:1S5Y, ECO:0007744|PDB:2PEG, ECO:0007744|PDB:4IRO |
Chain | Residue | Details |
B | GLY64 | |
D | GLY64 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: proximal binding residue => ECO:0000269|PubMed:7623382, ECO:0007744|PDB:1HBH, ECO:0007744|PDB:1PBX, ECO:0007744|PDB:1S5X, ECO:0007744|PDB:1S5Y, ECO:0007744|PDB:2H8D, ECO:0007744|PDB:2H8F, ECO:0007744|PDB:2PEG, ECO:0007744|PDB:3GKV, ECO:0007744|PDB:3GQG, ECO:0007744|PDB:4G51, ECO:0007744|PDB:4IRO, ECO:0007744|PDB:4ODC |
Chain | Residue | Details |
B | SER93 | |
D | SER93 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | MOD_RES: N-acetylserine => ECO:0000269|PubMed:7623382 |
Chain | Residue | Details |
A | SER1 | |
C | SER1 |