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2GJ9

Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and Rb+

Functional Information from GO Data
ChainGOidnamespacecontents
A0005525molecular_functionGTP binding
B0005525molecular_functionGTP binding
C0005525molecular_functionGTP binding
D0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE ALF A 401
ChainResidue
AHOH9
ATHR251
AGLY273
AGDP400
AMG402
ARB403
AHOH12
APRO225
AASN226
ALYS229
AILE247
AALA248
AGLY249
ATHR250

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH11
AHOH12
ASER230
ATHR251
AGDP400
AALF401

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB A 403
ChainResidue
AASN226
ATHR245
AILE247
ATHR250
AGDP400
AALF401

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE ALF B 501
ChainResidue
BHOH14
BPRO225
BASN226
BLYS229
BGLY249
BTHR250
BTHR251
BGLY273
BGDP500
BMG502
BRB503

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 502
ChainResidue
BSER230
BTHR251
BGDP500
BALF501

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB B 503
ChainResidue
BASN226
BTHR245
BILE247
BTHR250
BGDP500
BALF501

site_idAC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ALF C 601
ChainResidue
CHOH2
CHOH4
CHOH5
CPRO225
CASN226
CLYS229
CILE247
CALA248
CGLY249
CTHR250
CTHR251
CGLY273
CGDP600
CMG602
CRB603

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 602
ChainResidue
CHOH4
CHOH5
CSER230
CTHR251
CGDP600
CALF601

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB C 603
ChainResidue
CASN226
CTHR245
CILE247
CTHR250
CGDP600
CALF601

site_idBC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ALF D 701
ChainResidue
DHOH7
DPRO225
DASN226
DLYS229
DILE247
DALA248
DGLY249
DTHR250
DTHR251
DGLY273
DGDP700
DMG702
DRB703

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG D 702
ChainResidue
DSER230
DTHR251
DGDP700
DALF701

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB D 703
ChainResidue
DASN226
DTHR245
DILE247
DTHR250
DGDP700
DALF701

site_idBC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE GDP A 400
ChainResidue
AASN226
AALA227
AGLY228
ALYS229
ASER230
ASER231
ATHR245
AASP246
AASN335
ALYS336
AASP338
AILE339
ASER358
AALA359
AARG360
AALF401
AMG402
ARB403
AHOH11
AHOH12

site_idBC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE GDP B 500
ChainResidue
BASN226
BALA227
BGLY228
BLYS229
BSER230
BSER231
BVAL244
BTHR245
BASN335
BLYS336
BASP338
BILE339
BSER358
BALA359
BARG360
BALF501
BMG502
BRB503

site_idBC6
Number of Residues21
DetailsBINDING SITE FOR RESIDUE GDP C 600
ChainResidue
CHOH4
CHOH5
CASN226
CALA227
CGLY228
CLYS229
CSER230
CSER231
CVAL244
CTHR245
CASP246
CASN335
CLYS336
CASP338
CILE339
CSER358
CALA359
CARG360
CALF601
CMG602
CRB603

site_idBC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE GDP D 700
ChainResidue
DASN226
DALA227
DGLY228
DLYS229
DSER230
DSER231
DVAL244
DTHR245
DASP246
DASN335
DLYS336
DASP338
DILE339
DSER358
DALA359
DARG360
DALF701
DMG702
DRB703

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues36
DetailsBINDING:
ChainResidueDetails
AASN226
BASN226
BSER230
BTHR245
BILE247
BTHR250
BTHR251
BASP270
BASN335
BSER358
CASN226
ASER230
CSER230
CTHR245
CILE247
CTHR250
CTHR251
CASP270
CASN335
CSER358
DASN226
DSER230
ATHR245
DTHR245
DILE247
DTHR250
DTHR251
DASP270
DASN335
DSER358
AILE247
ATHR250
ATHR251
AASP270
AASN335
ASER358

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ALEU274

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BLEU274

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CLEU274

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
DLEU274

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PDB entries from 2024-10-30

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