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2GJ9

Structure of the MnmE G-domain in complex with GDP*AlF4-, Mg2+ and Rb+

Functional Information from GO Data
ChainGOidnamespacecontents
A0005525molecular_functionGTP binding
B0005525molecular_functionGTP binding
C0005525molecular_functionGTP binding
D0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE ALF A 401
ChainResidue
AHOH9
ATHR251
AGLY273
AGDP400
AMG402
ARB403
AHOH12
APRO225
AASN226
ALYS229
AILE247
AALA248
AGLY249
ATHR250

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH11
AHOH12
ASER230
ATHR251
AGDP400
AALF401

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB A 403
ChainResidue
AASN226
ATHR245
AILE247
ATHR250
AGDP400
AALF401

site_idAC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE ALF B 501
ChainResidue
BHOH14
BPRO225
BASN226
BLYS229
BGLY249
BTHR250
BTHR251
BGLY273
BGDP500
BMG502
BRB503

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG B 502
ChainResidue
BSER230
BTHR251
BGDP500
BALF501

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB B 503
ChainResidue
BASN226
BTHR245
BILE247
BTHR250
BGDP500
BALF501

site_idAC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ALF C 601
ChainResidue
CHOH2
CHOH4
CHOH5
CPRO225
CASN226
CLYS229
CILE247
CALA248
CGLY249
CTHR250
CTHR251
CGLY273
CGDP600
CMG602
CRB603

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG C 602
ChainResidue
CHOH4
CHOH5
CSER230
CTHR251
CGDP600
CALF601

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB C 603
ChainResidue
CASN226
CTHR245
CILE247
CTHR250
CGDP600
CALF601

site_idBC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ALF D 701
ChainResidue
DHOH7
DPRO225
DASN226
DLYS229
DILE247
DALA248
DGLY249
DTHR250
DTHR251
DGLY273
DGDP700
DMG702
DRB703

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG D 702
ChainResidue
DSER230
DTHR251
DGDP700
DALF701

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE RB D 703
ChainResidue
DASN226
DTHR245
DILE247
DTHR250
DGDP700
DALF701

site_idBC4
Number of Residues20
DetailsBINDING SITE FOR RESIDUE GDP A 400
ChainResidue
AASN226
AALA227
AGLY228
ALYS229
ASER230
ASER231
ATHR245
AASP246
AASN335
ALYS336
AASP338
AILE339
ASER358
AALA359
AARG360
AALF401
AMG402
ARB403
AHOH11
AHOH12

site_idBC5
Number of Residues18
DetailsBINDING SITE FOR RESIDUE GDP B 500
ChainResidue
BASN226
BALA227
BGLY228
BLYS229
BSER230
BSER231
BVAL244
BTHR245
BASN335
BLYS336
BASP338
BILE339
BSER358
BALA359
BARG360
BALF501
BMG502
BRB503

site_idBC6
Number of Residues21
DetailsBINDING SITE FOR RESIDUE GDP C 600
ChainResidue
CHOH4
CHOH5
CASN226
CALA227
CGLY228
CLYS229
CSER230
CSER231
CVAL244
CTHR245
CASP246
CASN335
CLYS336
CASP338
CILE339
CSER358
CALA359
CARG360
CALF601
CMG602
CRB603

site_idBC7
Number of Residues19
DetailsBINDING SITE FOR RESIDUE GDP D 700
ChainResidue
DASN226
DALA227
DGLY228
DLYS229
DSER230
DSER231
DVAL244
DTHR245
DASP246
DASN335
DLYS336
DASP338
DILE339
DSER358
DALA359
DARG360
DALF701
DMG702
DRB703

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues100
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
ALEU274

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
BLEU274

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
CLEU274

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
DLEU274

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PDB entries from 2025-10-22

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