2GIC
Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0005515 | molecular_function | protein binding |
| A | 0019013 | cellular_component | viral nucleocapsid |
| A | 0019029 | cellular_component | helical viral capsid |
| A | 0019083 | biological_process | viral transcription |
| A | 0030430 | cellular_component | host cell cytoplasm |
| A | 0039703 | biological_process | RNA replication |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0003723 | molecular_function | RNA binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0019013 | cellular_component | viral nucleocapsid |
| B | 0019029 | cellular_component | helical viral capsid |
| B | 0019083 | biological_process | viral transcription |
| B | 0030430 | cellular_component | host cell cytoplasm |
| B | 0039703 | biological_process | RNA replication |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003723 | molecular_function | RNA binding |
| C | 0005515 | molecular_function | protein binding |
| C | 0019013 | cellular_component | viral nucleocapsid |
| C | 0019029 | cellular_component | helical viral capsid |
| C | 0019083 | biological_process | viral transcription |
| C | 0030430 | cellular_component | host cell cytoplasm |
| C | 0039703 | biological_process | RNA replication |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0005515 | molecular_function | protein binding |
| D | 0019013 | cellular_component | viral nucleocapsid |
| D | 0019029 | cellular_component | helical viral capsid |
| D | 0019083 | biological_process | viral transcription |
| D | 0030430 | cellular_component | host cell cytoplasm |
| D | 0039703 | biological_process | RNA replication |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
| E | 0003723 | molecular_function | RNA binding |
| E | 0005515 | molecular_function | protein binding |
| E | 0019013 | cellular_component | viral nucleocapsid |
| E | 0019029 | cellular_component | helical viral capsid |
| E | 0019083 | biological_process | viral transcription |
| E | 0030430 | cellular_component | host cell cytoplasm |
| E | 0039703 | biological_process | RNA replication |
| E | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IUM A 423 |
| Chain | Residue |
| A | ASP123 |
| A | ASP374 |
| A | GLU377 |
| site_id | AC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IUM A 424 |
| Chain | Residue |
| A | GLU253 |
| A | GLU323 |
| B | ASP343 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE IUM B 423 |
| Chain | Residue |
| B | ASP123 |
| B | ASP374 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IUM B 424 |
| Chain | Residue |
| B | GLU323 |
| C | ASP343 |
| B | GLU253 |
| site_id | AC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE IUM C 423 |
| Chain | Residue |
| C | ASP374 |
| C | GLU377 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IUM C 424 |
| Chain | Residue |
| C | GLU253 |
| C | GLU323 |
| D | ASP343 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE IUM D 423 |
| Chain | Residue |
| D | ASP123 |
| D | GLU377 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE IUM D 424 |
| Chain | Residue |
| D | GLU253 |
| D | GLU323 |
| E | ASP343 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE IUM E 423 |
| Chain | Residue |
| E | ASP374 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE IUM E 424 |
| Chain | Residue |
| A | ASP343 |
| E | ARG252 |
| E | GLU253 |
| E | GLU323 |
| site_id | BC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE IUM E 425 |
| Chain | Residue |
| D | ASP384 |
| E | ASP358 |
| site_id | BC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE IUM A 426 |
| Chain | Residue |
| A | ASP384 |
| B | ASP358 |
| site_id | BC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE IUM B 425 |
| Chain | Residue |
| B | ASP384 |
| site_id | BC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE IUM C 425 |
| Chain | Residue |
| C | ASP384 |
