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2GFY

Structure of E. coli FabF(K335A) mutant with covalently linked dodecanoic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0004315molecular_function3-oxoacyl-[acyl-carrier-protein] synthase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006633biological_processfatty acid biosynthetic process
A0009409biological_processresponse to cold
A0016746molecular_functionacyltransferase activity
A0016747molecular_functionacyltransferase activity, transferring groups other than amino-acyl groups
A0019367biological_processfatty acid elongation, saturated fatty acid
A0042803molecular_functionprotein homodimerization activity
A0044281biological_processsmall molecule metabolic process
A1903966biological_processmonounsaturated fatty acid biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DAO A 1001
ChainResidue
AGLY107
AILE108
AILE138
AALA162
ACYS163
APHE202
AGLY399
APHE400

Functional Information from PROSITE/UniProt
site_idPS00606
Number of Residues17
DetailsKS3_1 Ketosynthase family 3 (KS3) active site signature. GPSisIAtACTSGvhNI
ChainResidueDetails
AGLY154-ILE170

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: For beta-ketoacyl synthase activity => ECO:0000255|PROSITE-ProRule:PRU01348, ECO:0000269|PubMed:10037680, ECO:0000305|PubMed:9482715
ChainResidueDetails
ATHR164

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: For beta-ketoacyl synthase activity => ECO:0000255|PROSITE-ProRule:PRU01348
ChainResidueDetails
AGLY304
ALEU341

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16710421, ECO:0000269|PubMed:19233644, ECO:0000269|PubMed:19581087, ECO:0007744|PDB:2GFX, ECO:0007744|PDB:3G0Y, ECO:0007744|PDB:3G11, ECO:0007744|PDB:3HNZ, ECO:0007744|PDB:3I8P
ChainResidueDetails
ASER271
APRO308

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16710421, ECO:0000269|PubMed:19233644, ECO:0007744|PDB:2GFX, ECO:0007744|PDB:3G0Y, ECO:0007744|PDB:3G11
ChainResidueDetails
AGLY304
ALEU341

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1kas
ChainResidueDetails
AHIS340
APHE400
AHIS303
ACYS163

site_idMCSA1
Number of Residues6
DetailsM-CSA 574
ChainResidueDetails
ATHR164covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, proton acceptor, proton donor
AGLY304activator, proton acceptor, proton donor
AALA315electrostatic stabiliser
ASER336electrostatic stabiliser
ALEU341electrostatic stabiliser, hydrogen bond donor
AGLY401electrostatic stabiliser

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PDB entries from 2024-07-17

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