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2FYN

Crystal Structure Analysis of the double mutant Rhodobacter Sphaeroides bc1 complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008121molecular_functionubiquinol-cytochrome-c reductase activity
A0009055molecular_functionelectron transfer activity
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0022904biological_processrespiratory electron transport chain
A0045275cellular_componentrespiratory chain complex III
A0046872molecular_functionmetal ion binding
A0070469cellular_componentrespirasome
A1902600biological_processproton transmembrane transport
B0005886cellular_componentplasma membrane
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B0070469cellular_componentrespirasome
C0005886cellular_componentplasma membrane
C0008121molecular_functionubiquinol-cytochrome-c reductase activity
C0016020cellular_componentmembrane
C0016491molecular_functionoxidoreductase activity
C0046872molecular_functionmetal ion binding
C0051537molecular_function2 iron, 2 sulfur cluster binding
C1902600biological_processproton transmembrane transport
D0005886cellular_componentplasma membrane
D0008121molecular_functionubiquinol-cytochrome-c reductase activity
D0009055molecular_functionelectron transfer activity
D0016020cellular_componentmembrane
D0016491molecular_functionoxidoreductase activity
D0022904biological_processrespiratory electron transport chain
D0045275cellular_componentrespiratory chain complex III
D0046872molecular_functionmetal ion binding
D0070469cellular_componentrespirasome
D1902600biological_processproton transmembrane transport
E0005886cellular_componentplasma membrane
E0009055molecular_functionelectron transfer activity
E0020037molecular_functionheme binding
E0046872molecular_functionmetal ion binding
E0070469cellular_componentrespirasome
F0005886cellular_componentplasma membrane
F0008121molecular_functionubiquinol-cytochrome-c reductase activity
F0016020cellular_componentmembrane
F0016491molecular_functionoxidoreductase activity
F0046872molecular_functionmetal ion binding
F0051537molecular_function2 iron, 2 sulfur cluster binding
F1902600biological_processproton transmembrane transport
G0005886cellular_componentplasma membrane
G0008121molecular_functionubiquinol-cytochrome-c reductase activity
G0009055molecular_functionelectron transfer activity
G0016020cellular_componentmembrane
G0016491molecular_functionoxidoreductase activity
G0022904biological_processrespiratory electron transport chain
G0045275cellular_componentrespiratory chain complex III
G0046872molecular_functionmetal ion binding
G0070469cellular_componentrespirasome
G1902600biological_processproton transmembrane transport
H0005886cellular_componentplasma membrane
H0009055molecular_functionelectron transfer activity
H0020037molecular_functionheme binding
H0046872molecular_functionmetal ion binding
H0070469cellular_componentrespirasome
I0005886cellular_componentplasma membrane
I0008121molecular_functionubiquinol-cytochrome-c reductase activity
I0016020cellular_componentmembrane
I0016491molecular_functionoxidoreductase activity
I0046872molecular_functionmetal ion binding
I0051537molecular_function2 iron, 2 sulfur cluster binding
I1902600biological_processproton transmembrane transport
J0005886cellular_componentplasma membrane
J0008121molecular_functionubiquinol-cytochrome-c reductase activity
J0009055molecular_functionelectron transfer activity
J0016020cellular_componentmembrane
J0016491molecular_functionoxidoreductase activity
J0022904biological_processrespiratory electron transport chain
J0045275cellular_componentrespiratory chain complex III
J0046872molecular_functionmetal ion binding
J0070469cellular_componentrespirasome
J1902600biological_processproton transmembrane transport
K0005886cellular_componentplasma membrane
K0009055molecular_functionelectron transfer activity
K0020037molecular_functionheme binding
K0046872molecular_functionmetal ion binding
K0070469cellular_componentrespirasome
L0005886cellular_componentplasma membrane
L0008121molecular_functionubiquinol-cytochrome-c reductase activity
L0016020cellular_componentmembrane
L0016491molecular_functionoxidoreductase activity
L0046872molecular_functionmetal ion binding
L0051537molecular_function2 iron, 2 sulfur cluster binding
L1902600biological_processproton transmembrane transport
M0005886cellular_componentplasma membrane
M0008121molecular_functionubiquinol-cytochrome-c reductase activity
M0009055molecular_functionelectron transfer activity
M0016020cellular_componentmembrane
M0016491molecular_functionoxidoreductase activity
M0022904biological_processrespiratory electron transport chain
M0045275cellular_componentrespiratory chain complex III
M0046872molecular_functionmetal ion binding
M0070469cellular_componentrespirasome
M1902600biological_processproton transmembrane transport
N0005886cellular_componentplasma membrane
N0009055molecular_functionelectron transfer activity
N0020037molecular_functionheme binding
N0046872molecular_functionmetal ion binding
N0070469cellular_componentrespirasome
O0005886cellular_componentplasma membrane
O0008121molecular_functionubiquinol-cytochrome-c reductase activity
O0016020cellular_componentmembrane
O0016491molecular_functionoxidoreductase activity
O0046872molecular_functionmetal ion binding
O0051537molecular_function2 iron, 2 sulfur cluster binding
O1902600biological_processproton transmembrane transport
P0005886cellular_componentplasma membrane
P0008121molecular_functionubiquinol-cytochrome-c reductase activity
P0009055molecular_functionelectron transfer activity
P0016020cellular_componentmembrane
P0016491molecular_functionoxidoreductase activity
P0022904biological_processrespiratory electron transport chain
P0045275cellular_componentrespiratory chain complex III
P0046872molecular_functionmetal ion binding
P0070469cellular_componentrespirasome
P1902600biological_processproton transmembrane transport
Q0005886cellular_componentplasma membrane
Q0009055molecular_functionelectron transfer activity
Q0020037molecular_functionheme binding
Q0046872molecular_functionmetal ion binding
Q0070469cellular_componentrespirasome
R0005886cellular_componentplasma membrane
R0008121molecular_functionubiquinol-cytochrome-c reductase activity
R0016020cellular_componentmembrane
R0016491molecular_functionoxidoreductase activity
R0046872molecular_functionmetal ion binding
R0051537molecular_function2 iron, 2 sulfur cluster binding
R1902600biological_processproton transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM A 501
ChainResidue
ATRP45
ATRP129
AGLY132
AMET133
AILE135
ATYR136
AVAL209
AHIS212
APHE216
ATHR219
AGLY220
AGLY48
AASN222
ALEU51
AALA52
AVAL108
AHIS111
AARG114
AARG125
ATHR128

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM A 502
ChainResidue
AGLN58
AILE59
AGLY62
AILE63
ALEU65
AARG94
AHIS97
AALA98
ATHR142
AGLY146
ALEU149
APRO150
AHIS198
ATYR199
APRO202

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM B 301
ChainResidue
BVAL35
BCYS36
BCYS39
BHIS40
BLEU94
BASN96
BPRO98
BMET103
BARG107
BTYR130
BALA184
BMET185
BPRO188

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES C 200
ChainResidue
CCYS129
CHIS131
CLEU132
CGLY133
CCYS149
CHIS152
CSER154

site_idAC5
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM D 501
ChainResidue
DTRP45
DGLY48
DLEU51
DALA52
DVAL108
DHIS111
DARG114
DARG125
DTHR128
DTRP129
DGLY132
DMET133
DILE135
DTYR136
DVAL209
DHIS212
DPHE216
DGLY220
DASN221
DASN222

site_idAC6
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM D 502
ChainResidue
DGLN58
DGLY62
DILE63
DARG94
DHIS97
DTHR142
DALA143
DGLY146
DTYR147
DLEU149
DPRO150
DHIS198
DTYR199
DPRO202

site_idAC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM E 301
ChainResidue
ELEU135
EPHE160
EILE183
EMET185
EPRO188
EVAL35
ECYS36
ECYS39
EHIS40
ELEU94
EASN96
EPRO98
EMET103
EARG107
ETYR130

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES F 200
ChainResidue
FCYS129
FHIS131
FLEU132
FGLY133
FCYS149
FHIS152
FSER154

site_idAC9
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEM G 501
ChainResidue
GTRP45
GGLY48
GLEU51
GALA52
GVAL108
GHIS111
GILE112
GARG114
GARG125
GTHR128
GTRP129
GGLY132
GMET133
GILE135
GTYR136
GVAL209
GHIS212
GPHE216
GASN222

site_idBC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM G 502
ChainResidue
GGLN58
GGLY62
GILE63
GVAL80
GARG94
GHIS97
GTHR142
GALA143
GGLY146
GTYR147
GPRO150
GHIS198
GTYR199
GPRO202

site_idBC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM H 301
ChainResidue
HVAL35
HCYS36
HCYS39
HHIS40
HASN96
HPRO98
HMET103
HARG107
HTYR130
HILE183
HALA184
HMET185
HPRO188

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE FES I 200
ChainResidue
ICYS129
IHIS131
ILEU132
IGLY133
ICYS134
ICYS149
IHIS152
ISER154

site_idBC4
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEM J 501
ChainResidue
JTRP45
JGLY48
JLEU51
JALA52
JVAL108
JHIS111
JARG114
JARG125
JTHR128
JTRP129
JGLY132
JMET133
JILE135
JTYR136
JVAL209
JHIS212
JPHE216
JGLY220
JASN222

site_idBC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM J 502
ChainResidue
JGLN58
JGLY62
JILE63
JARG94
JHIS97
JALA101
JTHR142
JGLY146
JTYR147
JPRO150
JHIS198
JTYR199
JPRO202

site_idBC6
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM K 301
ChainResidue
KVAL35
KCYS36
KCYS39
KHIS40
KASN96
KPRO98
KMET103
KARG107
KTYR130
KLEU135
KILE183
KALA184
KMET185
KPRO188

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE FES L 200
ChainResidue
LCYS129
LHIS131
LLEU132
LGLY133
LCYS134
LCYS149
LHIS152
LSER154

site_idBC8
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEM M 501
ChainResidue
MTRP45
MGLY48
MLEU51
MALA52
MVAL108
MHIS111
MILE112
MARG114
MSER120
MARG125
MTRP129
MGLY132
MMET133
MILE135
MTYR136
MVAL209
MHIS212
MPHE216
MASN221
MASN222

site_idBC9
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM M 502
ChainResidue
MGLN58
MGLY62
MILE63
MARG94
MHIS97
MALA98
MTHR142
MGLY146
MLEU149
MPRO150
MPHE195
MHIS198
MTYR199
MPRO202

site_idCC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM N 301
ChainResidue
NVAL35
NCYS36
NCYS39
NHIS40
NLEU94
NASN96
NPRO98
NARG107
NILE131
NLEU135
NPHE160
NILE183
NALA184
NMET185

site_idCC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES O 200
ChainResidue
OCYS129
OHIS131
OLEU132
OGLY133
OCYS149
OHIS152
OSER154

site_idCC3
Number of Residues21
DetailsBINDING SITE FOR RESIDUE HEM P 501
ChainResidue
PTRP45
PGLY48
PLEU51
PALA52
PVAL108
PHIS111
PARG114
PSER120
PARG125
PTHR128
PTRP129
PGLY132
PMET133
PILE135
PTYR136
PVAL209
PHIS212
PPHE216
PTHR219
PASN221
PASN222

site_idCC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM P 502
ChainResidue
PGLN58
PGLY62
PILE63
PLEU65
PARG94
PHIS97
PALA101
PTHR142
PGLY146
PTYR147
PLEU149
PPRO150
PHIS198
PTYR199
PPRO202

site_idCC5
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM Q 301
ChainResidue
QVAL35
QCYS36
QCYS39
QHIS40
QLEU94
QASN96
QPRO98
QMET103
QARG107
QTYR130
QILE131
QLEU135
QILE183
QALA184
QMET185
QPRO188

site_idCC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FES R 200
ChainResidue
RCYS129
RHIS131
RLEU132
RGLY133
RCYS149
RHIS152
RSER154

site_idCC7
Number of Residues15
DetailsBINDING SITE FOR RESIDUE SMA A 503
ChainResidue
APHE144
AGLY158
AVAL161
AILE162
AILE292
AVAL293
APRO294
AGLU295
APHE298
APHE301
ATYR302
APHE337
AILE340
FCYS151
FHIS152

site_idCC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SMA D 503
ChainResidue
CCYS151
CHIS152
DMET140
DGLY158
DVAL161
DILE162
DILE292
DPRO294
DGLU295
DPHE298
DTYR302
DMET336
DPHE337

site_idCC9
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SMA G 503
ChainResidue
GPHE144
GGLY158
GVAL161
GILE162
GPHE194
GILE292
GVAL293
GPRO294
GGLU295
GPHE298
GTYR302
GPHE337
LHIS152

site_idDC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE SMA J 503
ChainResidue
ICYS151
IHIS152
JMET140
JPHE144
JGLY158
JVAL161
JILE162
JILE292
JVAL293
JPRO294
JGLU295
JPHE298
JTYR302
JMET336

site_idDC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SMA M 503
ChainResidue
MPHE144
MGLY158
MVAL161
MILE162
MPHE194
MVAL293
MPRO294
MGLU295
MPHE298
MTYR302
RHIS152

site_idDC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE SMA P 503
ChainResidue
OCYS151
OHIS152
PMET145
PGLY158
PVAL161
PILE162
PLEU180
PILE292
PPRO294
PGLU295
PPHE298
PTYR302
PMET336
PPHE337

site_idDC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE LOP A 504
ChainResidue
AMET44
ATYR117
ATYR118
APHE263
AARG358
APHE374

site_idDC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE LOP D 504
ChainResidue
DPHE113
DARG114
DTYR117
DTYR118
DLEU274
DARG358
DTRP368
DPHE374

site_idDC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE LOP G 504
ChainResidue
GMET44
GTRP47
GASN99
GLEU103
GILE106
GPHE113
GTYR117
GTYR118
GARG358

site_idDC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE LOP J 504
ChainResidue
JMET44
JPHE113
JTYR117
JTYR118
JVAL262
JPHE263
JARG358
JPHE374

site_idDC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE LOP M 504
ChainResidue
MMET44
MPHE113
MTYR117
MTYR118
MARG358
MPHE374

site_idDC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE LOP P 504
ChainResidue
PPHE113
PTYR117
PTYR118
PLEU274
PARG358
PTRP368
PPHE374

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues120
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
CLEU15-ILE35
DPRO409-GLU445
GGLY3-VAL50
GGLY115-ILE130
GSER218-VAL253
GTRP348-ILE365
GPRO409-GLU445
JGLY3-VAL50
JGLY115-ILE130
JSER218-VAL253
JTRP348-ILE365
FLEU15-ILE35
JPRO409-GLU445
MGLY3-VAL50
MGLY115-ILE130
MSER218-VAL253
MTRP348-ILE365
MPRO409-GLU445
PGLY3-VAL50
PGLY115-ILE130
PSER218-VAL253
PTRP348-ILE365
ILEU15-ILE35
PPRO409-GLU445
LLEU15-ILE35
OLEU15-ILE35
RLEU15-ILE35
DGLY115-ILE130
DSER218-VAL253
DTRP348-ILE365

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00628
ChainResidueDetails
CCYS129
IHIS131
ICYS149
IHIS152
LCYS129
LHIS131
LCYS149
LHIS152
OCYS129
OHIS131
OCYS149
CHIS131
OHIS152
RCYS129
RHIS131
RCYS149
RHIS152
JLEU51-HIS68
JLEU96-ARG114
JVAL131-PRO150
JPHE195-HIS217
JPHE254-PRO271
CCYS149
JPHE331-PRO347
JTYR366-GLN383
JASP390-PRO409
MLEU51-HIS68
MLEU96-ARG114
MVAL131-PRO150
MPHE195-HIS217
MPHE254-PRO271
MPHE331-PRO347
MTYR366-GLN383
CHIS152
MASP390-PRO409
PLEU51-HIS68
PLEU96-ARG114
PVAL131-PRO150
PPHE195-HIS217
PPHE254-PRO271
PPHE331-PRO347
PTYR366-GLN383
PASP390-PRO409
FCYS129
FHIS131
FCYS149
FHIS152
ICYS129

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: axial binding residue
ChainResidueDetails
BHIS40
GTRP151-PHE194
GASN272-PHE330
GGLN384-TYR389
JTYR69-TYR95
JTRP151-PHE194
JASN272-PHE330
JGLN384-TYR389
MTYR69-TYR95
MTRP151-PHE194
MASN272-PHE330
EHIS40
MGLN384-TYR389
PTYR69-TYR95
PTRP151-PHE194
PASN272-PHE330
PGLN384-TYR389
HHIS40
KHIS40
NHIS40
QHIS40
DASN272-PHE330
DGLN384-TYR389
GTYR69-TYR95

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING: axial binding residue => ECO:0000255|PROSITE-ProRule:PRU00433
ChainResidueDetails
BMET185
GILE112
GTYR199
GILE213
JALA98
JILE112
JTYR199
JILE213
MALA98
MILE112
MTYR199
EMET185
MILE213
PALA98
PILE112
PTYR199
PILE213
HMET185
KMET185
NMET185
QMET185
DTYR199
DILE213
GALA98

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
FHIS152

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
OHIS152

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
IHIS152

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
RHIS152

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
CHIS152

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ndo
ChainResidueDetails
LHIS152

222415

PDB entries from 2024-07-10

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