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2FTM

Crystal structure of trypsin complexed with the BPTI variant (Tyr35->Gly)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004175molecular_functionendopeptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0007586biological_processdigestion
A0008236molecular_functionserine-type peptidase activity
A0046872molecular_functionmetal ion binding
A0097180cellular_componentserine protease inhibitor complex
A0097655molecular_functionserpin family protein binding
B0004867molecular_functionserine-type endopeptidase inhibitor activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE NA A 2001
ChainResidue
AASP71
AGLU77

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 2006
ChainResidue
ALYS169
APRO173
AGLY174

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 2010
ChainResidue
ALYS60
ASER61

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 2011
ChainResidue
AVAL154
ALYS156
AHOH715
APRO152
AASP153

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 2012
ChainResidue
ASER93
AASN95
AASN100
AASN101
ASER178
AASN179
AHOH464
AHOH676
AHOH782

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 2002
ChainResidue
AGLU70
AASN72
AVAL75
AGLU80
AHOH405
AHOH409

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 1001
ChainResidue
ATYR20
ACYS22
ATHR26

site_idAC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1002
ChainResidue
AGLY216
AGLY219
BTYR10
BGLY12
BPRO13
BHOH322
BHOH393
BSO42007

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 1003
ChainResidue
AALA129
AILE162
AASP165
APHE181
ALYS230
AHOH455

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 1004
ChainResidue
AGLN175
BARG39

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 2004
ChainResidue
BGLU7
BARG42
BHOH324
BHOH447
BHOH562
BHOH643

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 2005
ChainResidue
ALYS87
ALYS107
BARG1
BARG42
BHOH507
BHOH592
BHOH606

site_idBC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 2007
ChainResidue
AEDO1002
BPRO9
BTYR10
BTHR11
BGLY12
BHOH393
BHOH549

site_idBC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 B 2008
ChainResidue
AGLN50
ALYS107
ASER164
AASP165
ASER166
AHOH536
BARG1
BHOH607
BHOH701

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 2009
ChainResidue
AGLN50
ALYS109
ASER110
AALA111
BARG1

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 2003
ChainResidue
BGLN31
BGLN31
BTHR32
BTHR32
BHOH513
BHOH513

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
AVAL53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPVV
ChainResidueDetails
AASP189-VAL200

site_idPS00280
Number of Residues19
DetailsBPTI_KUNITZ_1 Pancreatic trypsin inhibitor (Kunitz) family signature. FvgGGCrakrnnFksaedC
ChainResidueDetails
BPHE33-CYS51

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Reactive bond for trypsin
ChainResidueDetails
BLYS15
AASP102
ASER195

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING:
ChainResidueDetails
AGLU70
AASN72
AVAL75
AGLU80
AASP189
AGLN192
ASER195

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
AHIS57

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY196

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY193

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AHIS57

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AGLY193
AHIS57

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AHIS57
AGLY196

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PDB entries from 2024-06-26

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