Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2FID

Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin

Functional Information from GO Data
ChainGOidnamespacecontents
B0003677molecular_functionDNA binding
B0008270molecular_functionzinc ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 901
ChainResidue
BCYS19
BCYS23
BCYS35
BCYS38

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS27-ASP52

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues34
DetailsZN_FING: A20-type => ECO:0000255|PROSITE-ProRule:PRU00451
ChainResidueDetails
BASP13-ARG47
AARG72

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00451
ChainResidueDetails
BCYS19
BCYS23
BCYS35
BCYS38

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48
ChainResidueDetails
ASER65

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: ADP-ribosylglycine => ECO:0000250|UniProtKB:P0CG48
ChainResidueDetails
AGLY76

site_idSWS_FT_FI5
Number of Residues7
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
ChainResidueDetails
ALYS6
ALYS11
ALYS27
ALYS29
ALYS33
ALYS48
ALYS63

site_idSWS_FT_FI6
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Gly-Lys) (interchain with K-? in acceptor proteins) => ECO:0000255|PROSITE-ProRule:PRU00214
ChainResidueDetails
AGLY76

217705

PDB entries from 2024-03-27

PDB statisticsPDBj update infoContact PDBjnumon