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2F62

Crystal structure of Nucleoside 2-deoxyribosyltransferase from Trypanosoma brucei at 1.5 A resolution with (2-ETHYLPHENYL)METHANOL bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0005634cellular_componentnucleus
A0009159biological_processdeoxyribonucleoside monophosphate catabolic process
A0070694molecular_functiondeoxyribonucleoside 5'-monophosphate N-glycosidase activity
B0005634cellular_componentnucleus
B0009159biological_processdeoxyribonucleoside monophosphate catabolic process
B0070694molecular_functiondeoxyribonucleoside 5'-monophosphate N-glycosidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 461
ChainResidue
AHIS6
AHIS8
AMSE9
ALYS11
AARG112
AARG125
AHOH524
AHOH537
AHOH540

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 289
ChainResidue
BHIS6
BHIS8
BMSE9
BLYS11
BARG112
BARG125
BHOH526
BHOH597

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 361
ChainResidue
BHIS7
BARG10
BASN40
BSER160
BHOH507

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 12M A 401
ChainResidue
AGLU127
APHE129
AASN134
ALEU135
AMSE136
BPRO46
BGLU50
BILE57
BASN61
BGOL463

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE 12M B 402
ChainResidue
AVAL19
APRO46
AGLU50
AILE57
AASN61
AGOL462
BGLU127
BASN134
BLEU135
BMSE136

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 462
ChainResidue
AALA15
AGLY16
APHE20
APRO46
AASP84
AGLY86
AGLU90
BASN134
B12M402

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL B 463
ChainResidue
AASN134
A12M401
BALA15
BGLY16
BPHE20
BPRO46
BASP84
BGLY86
BGLU90

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1f8x
ChainResidueDetails
ATYR13
AGLU90
AASN61
AASP84

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1f8x
ChainResidueDetails
BTYR13
BGLU90
BASN61
BASP84

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PDB entries from 2024-07-24

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