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2DET

Cocrystal structure of an RNA sulfuration enzyme MnmA and tRNA-Glu in the pre-reaction state

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0002143biological_processtRNA wobble position uridine thiolation
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0016740molecular_functiontransferase activity
A0016783molecular_functionsulfurtransferase activity
A0103016molecular_functiontRNA-uridine 2-sulfurtransferase activity
A1990228cellular_componentsulfurtransferase complex
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 5001
ChainResidue
ASER13
AGLY14
AGLY15
AASP17
ASER18

Functional Information from PROSITE/UniProt
site_idPS00070
Number of Residues12
DetailsALDEHYDE_DEHYDR_CYS Aldehyde dehydrogenases cysteine active site. VfYNGEVCLGGG
ChainResidueDetails
AVAL347-GLY358

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:16871210
ChainResidueDetails
ACYS102

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: Cysteine persulfide intermediate => ECO:0000269|PubMed:16871210
ChainResidueDetails
ACYS199

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING:
ChainResidueDetails
AGLY11
AMET37
AGLY127

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Interaction with tRNA
ChainResidueDetails
AHIS128
AGLN344

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1kp2
ChainResidueDetails
AASP136
ALYS104

224931

PDB entries from 2024-09-11

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