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2CBI

Structure of the Clostridium perfringens NagJ family 84 glycoside hydrolase, a homologue of human O-GlcNAcase

Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A1625
ChainResidue
AGLU282
AASP286
AHOH2313
BGLU96
BZN1632

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A1626
ChainResidue
AHOH2063
AGLN161
AASN208
AHIS442
AMET466

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B1625
ChainResidue
BGLU550
BHOH2333
BHOH2334

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B1626
ChainResidue
BASP117
BGLU145

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B1627
ChainResidue
AGLU118
BGLU51
BASP452

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ZN B1628
ChainResidue
BGLU170

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B1631
ChainResidue
AGLU96
BGLU282
BASP286

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B1632
ChainResidue
AGLU282
AASP286
ASO41625
BGLU96

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B1633
ChainResidue
AASP117
AGLU145

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B1634
ChainResidue
AGLU272
AHIS276

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ZN B1635
ChainResidue
BGLU272
BHIS276

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B1636
ChainResidue
AVAL546
AGLU549
AGLU550
BHOH2337

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B1637
ChainResidue
BASN312
BASN315
BGLU316
BASP358

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GBL A1627
ChainResidue
AASP297
AVAL331
ATYR335
ATHR366
ATRP394
AASN396
AGOL1628

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GBL B1629
ChainResidue
BASP297
BVAL331
BTYR335
BTHR366
BTRP394
BASN396
BGOL1630

site_idBC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A1628
ChainResidue
AGLY187
AASN396
AVAL399
AASP401
AASN429
ATRP490
AGBL1627
AHOH2050
BLEU623

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B1630
ChainResidue
ALEU623
BASN396
BASP401
BASN429
BGBL1629
BHOH2335
BHOH2336

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues544
DetailsDomain: {"description":"GH84","evidences":[{"source":"PROSITE-ProRule","id":"PRU01353","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues580
DetailsRegion: {"description":"Catalytic domain","evidences":[{"source":"UniProtKB","id":"Q0TR53","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues104
DetailsCoiled coil: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PROSITE-ProRule","id":"PRU01353","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q0TR53","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

238895

PDB entries from 2025-07-16

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