2C97
LUMAZINE SYNTHASE FROM MYCOBACTERIUM TUBERCULOSIS BOUND TO 4-(6- chloro-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)butyl phosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000906 | molecular_function | 6,7-dimethyl-8-ribityllumazine synthase activity |
A | 0005829 | cellular_component | cytosol |
A | 0009231 | biological_process | riboflavin biosynthetic process |
A | 0009349 | cellular_component | riboflavin synthase complex |
A | 0016740 | molecular_function | transferase activity |
B | 0000906 | molecular_function | 6,7-dimethyl-8-ribityllumazine synthase activity |
B | 0005829 | cellular_component | cytosol |
B | 0009231 | biological_process | riboflavin biosynthetic process |
B | 0009349 | cellular_component | riboflavin synthase complex |
B | 0016740 | molecular_function | transferase activity |
C | 0000906 | molecular_function | 6,7-dimethyl-8-ribityllumazine synthase activity |
C | 0005829 | cellular_component | cytosol |
C | 0009231 | biological_process | riboflavin biosynthetic process |
C | 0009349 | cellular_component | riboflavin synthase complex |
C | 0016740 | molecular_function | transferase activity |
D | 0000906 | molecular_function | 6,7-dimethyl-8-ribityllumazine synthase activity |
D | 0005829 | cellular_component | cytosol |
D | 0009231 | biological_process | riboflavin biosynthetic process |
D | 0009349 | cellular_component | riboflavin synthase complex |
D | 0016740 | molecular_function | transferase activity |
E | 0000906 | molecular_function | 6,7-dimethyl-8-ribityllumazine synthase activity |
E | 0005829 | cellular_component | cytosol |
E | 0009231 | biological_process | riboflavin biosynthetic process |
E | 0009349 | cellular_component | riboflavin synthase complex |
E | 0016740 | molecular_function | transferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE K A1161 |
Chain | Residue |
A | ALA70 |
A | HIS73 |
A | THR110 |
A | HOH2049 |
A | HOH2081 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE K A1162 |
Chain | Residue |
A | HOH2019 |
A | ALA34 |
A | ALA129 |
A | GLY130 |
A | ASP137 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE K A1163 |
Chain | Residue |
A | GLU155 |
A | LEU156 |
A | ARG157 |
A | HOH2117 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE K A1164 |
Chain | Residue |
A | ARG84 |
A | ASN120 |
A | HOH2062 |
A | HOH2092 |
site_id | AC5 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT A1165 |
Chain | Residue |
A | HOH2124 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE K B1161 |
Chain | Residue |
B | ALA70 |
B | HIS73 |
B | THR110 |
B | HOH2068 |
site_id | AC7 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE K B1162 |
Chain | Residue |
B | ALA34 |
B | GLY38 |
B | ALA129 |
B | GLY130 |
B | ASP137 |
B | HOH2015 |
B | HOH2082 |
site_id | AC8 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE K B1163 |
Chain | Residue |
B | GLU155 |
B | LEU156 |
B | ARG157 |
B | HOH2095 |
E | LEU156 |
E | ARG157 |
E | HOH2103 |
site_id | AC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE K B1164 |
Chain | Residue |
B | ARG84 |
B | ASN120 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE K C1161 |
Chain | Residue |
C | ALA70 |
C | HIS73 |
C | THR110 |
C | HOH2061 |
site_id | BC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE K C1162 |
Chain | Residue |
C | GLU155 |
C | LEU156 |
C | ARG157 |
D | GLU155 |
D | LEU156 |
D | ARG157 |
D | HOH2101 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE K C1163 |
Chain | Residue |
C | ARG84 |
C | ASN120 |
site_id | BC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE ACT C1164 |
Chain | Residue |
C | LEU57 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K D1161 |
Chain | Residue |
D | ALA70 |
D | HIS73 |
D | THR110 |
D | HOH2020 |
D | HOH2048 |
D | HOH2073 |
site_id | BC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE K D1162 |
Chain | Residue |
D | ARG84 |
D | ASN120 |
D | HOH2053 |
site_id | BC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ACT D1163 |
Chain | Residue |
D | SER26 |
D | ARG55 |
D | HOH2107 |
E | HOH2098 |
site_id | BC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K E1161 |
Chain | Residue |
E | ALA70 |
E | HIS73 |
E | THR110 |
E | HOH2022 |
E | HOH2047 |
E | HOH2073 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K E1162 |
Chain | Residue |
E | ALA34 |
E | ALA129 |
E | GLY130 |
E | ASP137 |
E | HOH2016 |
E | HOH2017 |
site_id | CC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE K E1163 |
Chain | Residue |
E | ARG84 |
E | ASN120 |
E | HOH2053 |
site_id | CC2 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE JCL A 701 |
Chain | Residue |
A | TRP27 |
A | HIS28 |
A | GLY58 |
A | ALA59 |
A | VAL81 |
A | VAL82 |
A | ILE83 |
A | GLY85 |
A | GLN86 |
A | THR87 |
A | HOH2010 |
A | HOH2058 |
A | HOH2119 |
A | HOH2120 |
A | HOH2121 |
A | HOH2122 |
A | HOH2123 |
B | ARG128 |
site_id | CC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE JCL B 701 |
Chain | Residue |
B | HIS28 |
B | GLY58 |
B | ALA59 |
B | VAL81 |
B | VAL82 |
B | ILE83 |
B | GLY85 |
B | GLN86 |
B | THR87 |
B | HOH2006 |
B | HOH2097 |
B | HOH2098 |
B | HOH2099 |
B | HOH2100 |
C | ARG128 |
site_id | CC4 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE JCL C 701 |
Chain | Residue |
C | HIS28 |
C | GLY58 |
C | ALA59 |
C | VAL81 |
C | VAL82 |
C | ILE83 |
C | GLY85 |
C | GLN86 |
C | THR87 |
C | HOH2005 |
C | HOH2078 |
C | HOH2079 |
C | HOH2080 |
D | ARG128 |
D | HOH2078 |
D | HOH2093 |
site_id | CC5 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE JCL D 701 |
Chain | Residue |
D | TRP27 |
D | HIS28 |
D | GLY58 |
D | ALA59 |
D | VAL81 |
D | VAL82 |
D | ILE83 |
D | GLY85 |
D | GLN86 |
D | THR87 |
D | HOH2005 |
D | HOH2009 |
D | HOH2104 |
D | HOH2105 |
D | HOH2106 |
E | ARG128 |
site_id | CC6 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE JCL E 701 |
Chain | Residue |
A | ARG128 |
A | HOH2085 |
A | HOH2108 |
E | TRP27 |
E | HIS28 |
E | GLY58 |
E | ALA59 |
E | VAL81 |
E | VAL82 |
E | ILE83 |
E | GLY85 |
E | GLN86 |
E | THR87 |
E | HOH2007 |
E | HOH2052 |
E | HOH2106 |
E | HOH2107 |
E | HOH2108 |
E | HOH2109 |
E | HOH2110 |
site_id | CC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE DTD E1166 |
Chain | Residue |
D | VAL42 |
D | GLY45 |
E | LYS41 |
E | VAL42 |
E | GLY45 |
E | CYS46 |
site_id | CC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD A1166 |
Chain | Residue |
A | THR98 |
A | LEU101 |
A | ASN114 |
A | HOH2072 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD A1167 |
Chain | Residue |
A | GLN99 |
B | GLN99 |
C | GLN99 |
D | GLN99 |
site_id | DC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD B1165 |
Chain | Residue |
A | HIS89 |
A | ALA96 |
B | THR98 |
B | LEU101 |
B | ASN114 |
B | HOH2059 |
site_id | DC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD C1165 |
Chain | Residue |
B | TYR92 |
C | VAL97 |
C | THR98 |
C | LEU101 |
C | ASN114 |
C | HOH2081 |
site_id | DC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD D1164 |
Chain | Residue |
C | ILE60 |
C | TYR92 |
D | THR98 |
D | LEU101 |
D | ASN114 |
site_id | DC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD E1165 |
Chain | Residue |
E | THR98 |
E | ASN114 |
E | VAL116 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 5 |
Details | ACT_SITE: Proton donor => ECO:0000255 |
Chain | Residue | Details |
A | HIS89 | |
B | HIS89 | |
C | HIS89 | |
D | HIS89 | |
E | HIS89 |
site_id | SWS_FT_FI2 |
Number of Residues | 20 |
Details | BINDING: |
Chain | Residue | Details |
A | TRP27 | |
C | ALA59 | |
C | VAL81 | |
C | ASN114 | |
D | TRP27 | |
D | ALA59 | |
D | VAL81 | |
D | ASN114 | |
E | TRP27 | |
E | ALA59 | |
E | VAL81 | |
A | ALA59 | |
E | ASN114 | |
A | VAL81 | |
A | ASN114 | |
B | TRP27 | |
B | ALA59 | |
B | VAL81 | |
B | ASN114 | |
C | TRP27 |
site_id | SWS_FT_FI3 |
Number of Residues | 10 |
Details | BINDING: BINDING => ECO:0000305 |
Chain | Residue | Details |
A | GLN86 | |
E | ARG128 | |
A | ARG128 | |
B | GLN86 | |
B | ARG128 | |
C | GLN86 | |
C | ARG128 | |
D | GLN86 | |
D | ARG128 | |
E | GLN86 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1rvv |
Chain | Residue | Details |
A | HIS89 |
site_id | CSA2 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1rvv |
Chain | Residue | Details |
B | HIS89 |
site_id | CSA3 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1rvv |
Chain | Residue | Details |
C | HIS89 |
site_id | CSA4 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1rvv |
Chain | Residue | Details |
D | HIS89 |
site_id | CSA5 |
Number of Residues | 1 |
Details | Annotated By Reference To The Literature 1rvv |
Chain | Residue | Details |
E | HIS89 |