2BMD
high resolution structure of GDP-bound human Rab4a
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE GDP A1187 |
| Chain | Residue |
| A | GLY20 |
| A | ALA67 |
| A | MET110 |
| A | ASN123 |
| A | LYS124 |
| A | ASP126 |
| A | LEU127 |
| A | SER153 |
| A | ALA154 |
| A | LEU155 |
| A | HOH2049 |
| A | THR21 |
| A | HOH2050 |
| A | HOH2201 |
| A | HOH2202 |
| A | HOH2203 |
| A | HOH2204 |
| A | HOH2205 |
| A | GLY22 |
| A | LYS23 |
| A | SER24 |
| A | CYS25 |
| A | PHE35 |
| A | GLY55 |
| A | LYS57 |
| site_id | AC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A1188 |
| Chain | Residue |
| A | GLU70 |
| A | ARG71 |
| A | PHE72 |
| A | TRP104 |
| A | ASP107 |
| A | THR156 |
| A | HOH2206 |
| A | HOH2207 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL A1189 |
| Chain | Residue |
| A | TYR98 |
| A | ASN99 |
| A | LEU101 |
| A | THR102 |
| A | PHE141 |
| A | HOH2146 |
| A | HOH2208 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 9 |
| Details | Motif: {"description":"Switch 2","evidences":[{"source":"UniProtKB","id":"P61106","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"16034420","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1Z0K","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"source":"PDB","id":"1Z0K","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"15907487","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"16034420","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1YU9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1Z0K","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2BME","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P61018","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"5-glutamyl serotonin","evidences":[{"source":"UniProtKB","id":"P56371","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLN69 |
| site_id | CSA2 |
| Number of Residues | 1 |
| Details | Annotated By Reference To The Literature 1ksj |
| Chain | Residue | Details |
| A | GLY20 |
