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2BCN

Solvent isotope effects on interfacial protein electron transfer between cytochrome c and cytochrome c peroxidase

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0006979biological_processresponse to oxidative stress
A0020037molecular_functionheme binding
A0034599biological_processcellular response to oxidative stress
B0005515molecular_functionprotein binding
B0005739cellular_componentmitochondrion
B0005758cellular_componentmitochondrial intermembrane space
B0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
B0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
B0009055molecular_functionelectron transfer activity
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
B1901612molecular_functioncardiolipin binding
C0004601molecular_functionperoxidase activity
C0006979biological_processresponse to oxidative stress
C0020037molecular_functionheme binding
C0034599biological_processcellular response to oxidative stress
Functional Information from PDB Data
site_idAC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE ZNH A 295
ChainResidue
APRO44
AHIS175
AGLY178
ALYS179
ATHR180
AHIS181
AASN184
ASER185
ATRP191
ALEU232
AHOH1017
AVAL45
AHOH1079
AHOH1201
AARG48
ATRP51
APRO145
AALA147
ALEU171
AMET172
AALA174

site_idAC2
Number of Residues22
DetailsBINDING SITE FOR RESIDUE ZNH C 295
ChainResidue
CPRO44
CVAL45
CARG48
CTRP51
CALA147
CLEU171
CALA174
CHIS175
CLEU177
CGLY178
CLYS179
CTHR180
CHIS181
CASN184
CSER185
CTRP191
CLEU232
CTHR234
CHOH1054
CHOH1133
CHOH1209
CHOH1454

site_idAC3
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC B 109
ChainResidue
BARG18
BCYS19
BCYS22
BHIS23
BVAL33
BLEU37
BSER45
BGLY46
BTYR53
BTHR54
BASN57
BTRP64
BMET69
BLEU73
BTHR83
BLYS84
BMET85
BALA86
BHOH1147

Functional Information from PROSITE/UniProt
site_idPS00435
Number of Residues11
DetailsPEROXIDASE_1 Peroxidases proximal heme-ligand signature. EVVALMGAHAL
ChainResidueDetails
AGLU167-LEU177

site_idPS00436
Number of Residues12
DetailsPEROXIDASE_2 Peroxidases active site signature. GPvlVRLaWHIS
ChainResidueDetails
AGLY43-SER54

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS52
CHIS52

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Tryptophan radical intermediate => ECO:0000269|PubMed:2851317
ChainResidueDetails
ATRP191
CTRP191

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:10722697, ECO:0000269|PubMed:11170452, ECO:0000269|PubMed:2169873, ECO:0000269|PubMed:6092361, ECO:0000269|PubMed:8384877, ECO:0000269|PubMed:8673607
ChainResidueDetails
AHIS175
CHIS175

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Transition state stabilizer
ChainResidueDetails
AARG48
CARG48

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphotyrosine => ECO:0007744|PubMed:18407956
ChainResidueDetails
ATYR153
CTYR153

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
AARG48
AHIS52
AASN82

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1apx
ChainResidueDetails
CARG48
CHIS52
CASN82

site_idMCSA1
Number of Residues3
DetailsM-CSA 709
ChainResidueDetails
AARG48electrostatic stabiliser
AHIS52electrostatic stabiliser, proton acceptor, proton donor
ATRP191single electron acceptor, single electron donor

site_idMCSA2
Number of Residues3
DetailsM-CSA 709
ChainResidueDetails
CARG48electrostatic stabiliser
CHIS52electrostatic stabiliser, proton acceptor, proton donor
CTRP191single electron acceptor, single electron donor

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PDB entries from 2024-11-06

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