2BA0

Archaeal exosome core

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000178	cellular_component	exosome (RNase complex)
A	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A	0003676	molecular_function	nucleic acid binding
A	0003723	molecular_function	RNA binding
A	0005737	cellular_component	cytoplasm
A	0006401	biological_process	RNA catabolic process
A	0008143	molecular_function	poly(A) binding
A	0034475	biological_process	U4 snRNA 3'-end processing
A	0071034	biological_process	CUT catabolic process
A	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing
B	0000178	cellular_component	exosome (RNase complex)
B	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B	0003676	molecular_function	nucleic acid binding
B	0003723	molecular_function	RNA binding
B	0005737	cellular_component	cytoplasm
B	0006401	biological_process	RNA catabolic process
B	0008143	molecular_function	poly(A) binding
B	0034475	biological_process	U4 snRNA 3'-end processing
B	0071034	biological_process	CUT catabolic process
B	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing
C	0000178	cellular_component	exosome (RNase complex)
C	0000467	biological_process	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
C	0003676	molecular_function	nucleic acid binding
C	0003723	molecular_function	RNA binding
C	0005737	cellular_component	cytoplasm
C	0006401	biological_process	RNA catabolic process
C	0008143	molecular_function	poly(A) binding
C	0034475	biological_process	U4 snRNA 3'-end processing
C	0071034	biological_process	CUT catabolic process
C	0071051	biological_process	poly(A)-dependent snoRNA 3'-end processing
D	0000175	molecular_function	3'-5'-RNA exonuclease activity
D	0000177	cellular_component	cytoplasmic exosome (RNase complex)
D	0000178	cellular_component	exosome (RNase complex)
D	0000956	biological_process	nuclear-transcribed mRNA catabolic process
D	0003723	molecular_function	RNA binding
D	0004518	molecular_function	nuclease activity
D	0004527	molecular_function	exonuclease activity
D	0005737	cellular_component	cytoplasm
D	0006401	biological_process	RNA catabolic process
D	0010467	biological_process	gene expression
D	0016075	biological_process	rRNA catabolic process
D	0016787	molecular_function	hydrolase activity
D	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
D	1902494	cellular_component	catalytic complex
E	0000175	molecular_function	3'-5'-RNA exonuclease activity
E	0000177	cellular_component	cytoplasmic exosome (RNase complex)
E	0000178	cellular_component	exosome (RNase complex)
E	0000956	biological_process	nuclear-transcribed mRNA catabolic process
E	0003723	molecular_function	RNA binding
E	0004518	molecular_function	nuclease activity
E	0004527	molecular_function	exonuclease activity
E	0005737	cellular_component	cytoplasm
E	0006401	biological_process	RNA catabolic process
E	0010467	biological_process	gene expression
E	0016075	biological_process	rRNA catabolic process
E	0016787	molecular_function	hydrolase activity
E	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
E	1902494	cellular_component	catalytic complex
F	0000175	molecular_function	3'-5'-RNA exonuclease activity
F	0000177	cellular_component	cytoplasmic exosome (RNase complex)
F	0000178	cellular_component	exosome (RNase complex)
F	0000956	biological_process	nuclear-transcribed mRNA catabolic process
F	0003723	molecular_function	RNA binding
F	0004518	molecular_function	nuclease activity
F	0004527	molecular_function	exonuclease activity
F	0005737	cellular_component	cytoplasm
F	0006401	biological_process	RNA catabolic process
F	0010467	biological_process	gene expression
F	0016075	biological_process	rRNA catabolic process
F	0016787	molecular_function	hydrolase activity
F	0016896	molecular_function	RNA exonuclease activity, producing 5'-phosphomonoesters
F	1902494	cellular_component	catalytic complex
G	0000177	cellular_component	cytoplasmic exosome (RNase complex)
G	0000178	cellular_component	exosome (RNase complex)
G	0005737	cellular_component	cytoplasm
G	0006401	biological_process	RNA catabolic process
G	0016075	biological_process	rRNA catabolic process
G	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding
H	0000177	cellular_component	cytoplasmic exosome (RNase complex)
H	0000178	cellular_component	exosome (RNase complex)
H	0005737	cellular_component	cytoplasm
H	0006401	biological_process	RNA catabolic process
H	0016075	biological_process	rRNA catabolic process
H	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding
I	0000177	cellular_component	cytoplasmic exosome (RNase complex)
I	0000178	cellular_component	exosome (RNase complex)
I	0005737	cellular_component	cytoplasm
I	0006401	biological_process	RNA catabolic process
I	0016075	biological_process	rRNA catabolic process
I	0035925	molecular_function	mRNA 3'-UTR AU-rich region binding

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	207
Details	Domain: {"description":"S1 motif","evidences":[{"source":"HAMAP-Rule","id":"MF_00623","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	174
Details	Domain: {"description":"KH","evidences":[{"source":"HAMAP-Rule","id":"MF_00623","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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