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1ZL2

Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and phosphate ion at 1.85A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004850molecular_functionuridine phosphorylase activity
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0009166biological_processnucleotide catabolic process
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0044206biological_processUMP salvage
A0047847molecular_functiondeoxyuridine phosphorylase activity
B0003824molecular_functioncatalytic activity
B0004850molecular_functionuridine phosphorylase activity
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0009166biological_processnucleotide catabolic process
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0044206biological_processUMP salvage
B0047847molecular_functiondeoxyuridine phosphorylase activity
C0003824molecular_functioncatalytic activity
C0004850molecular_functionuridine phosphorylase activity
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0009116biological_processnucleoside metabolic process
C0009164biological_processnucleoside catabolic process
C0009166biological_processnucleotide catabolic process
C0016757molecular_functionglycosyltransferase activity
C0016763molecular_functionpentosyltransferase activity
C0044206biological_processUMP salvage
C0047847molecular_functiondeoxyuridine phosphorylase activity
D0003824molecular_functioncatalytic activity
D0004850molecular_functionuridine phosphorylase activity
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0009116biological_processnucleoside metabolic process
D0009164biological_processnucleoside catabolic process
D0009166biological_processnucleotide catabolic process
D0016757molecular_functionglycosyltransferase activity
D0016763molecular_functionpentosyltransferase activity
D0044206biological_processUMP salvage
D0047847molecular_functiondeoxyuridine phosphorylase activity
E0003824molecular_functioncatalytic activity
E0004850molecular_functionuridine phosphorylase activity
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0009116biological_processnucleoside metabolic process
E0009164biological_processnucleoside catabolic process
E0009166biological_processnucleotide catabolic process
E0016757molecular_functionglycosyltransferase activity
E0016763molecular_functionpentosyltransferase activity
E0044206biological_processUMP salvage
E0047847molecular_functiondeoxyuridine phosphorylase activity
F0003824molecular_functioncatalytic activity
F0004850molecular_functionuridine phosphorylase activity
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0009116biological_processnucleoside metabolic process
F0009164biological_processnucleoside catabolic process
F0009166biological_processnucleotide catabolic process
F0016757molecular_functionglycosyltransferase activity
F0016763molecular_functionpentosyltransferase activity
F0044206biological_processUMP salvage
F0047847molecular_functiondeoxyuridine phosphorylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 D 7003
ChainResidue
BARG6048
DGLY3026
DARG3030
DARG3091
DILE3092
DGLY3093
DTHR3094
DANU7013

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 F 7004
ChainResidue
FGLY4026
FARG4091
FILE4092
FGLY4093
FTHR4094
FANU7014
FHOH8624
AARG1048

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 7006
ChainResidue
BGLY6026
BARG6030
BARG6091
BILE6092
BGLY6093
BTHR6094
BANU7016
DARG3048

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE ANU D 7013
ChainResidue
BHIS6008
BARG6048
DTHR3094
DPHE3162
DGLN3166
DARG3168
DMET3197
DGLU3198
DPO47003

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE ANU F 7014
ChainResidue
AHIS1008
AARG1048
FTHR4094
FPHE4162
FGLN4166
FARG4168
FGLU4196
FMET4197
FGLU4198
FPO47004
FHOH8334

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ANU B 7016
ChainResidue
BTHR6094
BGLY6096
BPHE6162
BGLN6166
BARG6168
BGLU6196
BMET6197
BGLU6198
BPO47006
BHOH8056
BHOH8369
DHIS3008
DARG3048

Functional Information from PROSITE/UniProt
site_idPS01232
Number of Residues16
DetailsPNP_UDP_1 Purine and other phosphorylases family 1 signature. StGIGgPStSIaveEL
ChainResidueDetails
ASER1066-LEU1081

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
AARG1223
AGLU1080
AHIS1008

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
BHIS6008
BGLU6080
BARG6223

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
CARG2223
CGLU2080
CHIS2008

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
DGLU3080
DHIS3008
DARG3223

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
EGLU5080
EARG5223
EHIS5008

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1t0u
ChainResidueDetails
FHIS4008
FGLU4080
FARG4223

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PDB entries from 2024-11-06

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