1ZL2
Crystal structure of the uridine phosphorylase from Salmonella typhimurium in complex with 2,2'-anhydrouridine and phosphate ion at 1.85A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X13 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X13 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-12-21 |
Detector | MARRESEARCH |
Wavelength(s) | 0.803 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 88.790, 124.070, 134.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.090 - 1.850 |
R-factor | 0.178 |
Rwork | 0.178 |
R-free | 0.19800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sj9 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.400 |
Data scaling software | XDS |
Phasing software | MOLREP (V. 7.5.01) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.090 | 1.970 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.123 | 0.399 |
Number of reflections | 120586 | |
<I/σ(I)> | 11.24 | 3.55 |
Completeness [%] | 95.1 | 96.2 |
Redundancy | 3.25 | 3.25 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.2 | 293 | PEG 4000, SODIUM-ACETATE TRIHYDRATE, 2,2'-ANHYDROURIDINE, SODIUM PHOSPHATE, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K |