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1YXL

Crystal structure of a novel phospholipase A2 from Naja naja sagittifera at 1.5 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004623molecular_functionphospholipase A2 activity
A0005509molecular_functioncalcium ion binding
A0005543molecular_functionphospholipid binding
A0005576cellular_componentextracellular region
A0006644biological_processphospholipid metabolic process
A0016042biological_processlipid catabolic process
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
A0047498molecular_functioncalcium-dependent phospholipase A2 activity
A0050482biological_processarachidonate secretion
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 201
ChainResidue
ATYR28
AGLY30
AGLY32
AASP49
AACY301
AHOH450

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 A 401
ChainResidue
ALYS66
ATHR67
AGLN74
AHOH423
AHOH504
AHOH505
AGLU54
AASN57
AARG62

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE ACY A 301
ChainResidue
ATYR28
AGLY30
AHIS48
AASP49
ATYR64
ACA201
AHOH481
AHOH526

Functional Information from PROSITE/UniProt
site_idPS00118
Number of Residues8
DetailsPA2_HIS Phospholipase A2 histidine active site. CCQvHDnC
ChainResidueDetails
ACYS44-CYS51

site_idPS00119
Number of Residues11
DetailsPA2_ASP Phospholipase A2 aspartic acid active site. VCDCDRLAaIC
ChainResidueDetails
AVAL90-CYS100

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000305|PubMed:15823962
ChainResidueDetails
AHIS48
AASP94

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15823962, ECO:0007744|PDB:1OXR
ChainResidueDetails
ATYR28
AGLY30
AGLY32
AASP49

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1n29
ChainResidueDetails
AHIS48
AGLY30
AASP94

226707

PDB entries from 2024-10-30

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