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1YT5

Crystal structure of NAD kinase from Thermotoga maritima

Functional Information from GO Data
ChainGOidnamespacecontents
A0003951molecular_functionNAD+ kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006741biological_processNADP biosynthetic process
A0016301molecular_functionkinase activity
A0019674biological_processNAD metabolic process
A0046872molecular_functionmetal ion binding
A0051287molecular_functionNAD binding
B0003951molecular_functionNAD+ kinase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006741biological_processNADP biosynthetic process
B0016301molecular_functionkinase activity
B0019674biological_processNAD metabolic process
B0046872molecular_functionmetal ion binding
B0051287molecular_functionNAD binding
C0003951molecular_functionNAD+ kinase activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006741biological_processNADP biosynthetic process
C0016301molecular_functionkinase activity
C0019674biological_processNAD metabolic process
C0046872molecular_functionmetal ion binding
C0051287molecular_functionNAD binding
D0003951molecular_functionNAD+ kinase activity
D0005524molecular_functionATP binding
D0005737cellular_componentcytoplasm
D0006741biological_processNADP biosynthetic process
D0016301molecular_functionkinase activity
D0019674biological_processNAD metabolic process
D0046872molecular_functionmetal ion binding
D0051287molecular_functionNAD binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
AGLY113
AASN114
ASO4309

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 302
ChainResidue
ASO4304
ASO4309
BGLY113
BASN114

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 D 303
ChainResidue
DGLY113
DASN114

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
AHIS115
ALEU116
ASO4309
BSO4302

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 C 305
ChainResidue
CGLY113
CASN114
DSO4308

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 306
ChainResidue
DGLY50
DASP51
DLYS71
DLYS250

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 C 307
ChainResidue
CGLY50
CASP51

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 D 308
ChainResidue
CASN114
CHIS115
CSO4305
DASN114
DHIS115
DSO4314

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 309
ChainResidue
AASN114
AHIS115
ASO4301
ASO4304
BASN114
BHIS115
BSO4302

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 310
ChainResidue
BGLY50
BASP51
BLYS71
BLYS250

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 D 311
ChainResidue
DASP126
DLEU127

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 312
ChainResidue
DARG207
DASP208
DLYS222

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 313
ChainResidue
AARG248
AARG255
AARG256

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 D 314
ChainResidue
DHIS115
DLEU116
DSO4308

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 D 315
ChainResidue
DARG248
DASP249
DARG255
DARG256

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 316
ChainResidue
AARG207
AASP208
ALYS222

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 317
ChainResidue
AGLY50
AASP51
AGLY52
AARG74
ALEU75
AGLY76
ALYS250

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 B 318
ChainResidue
BARG248
BARG255
BARG256

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsACT_SITE: Proton acceptor => ECO:0000255|HAMAP-Rule:MF_00361
ChainResidueDetails
AASP51
BASP51
CASP51
DASP51

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00361
ChainResidueDetails
AASP51
BASP149
BTHR160
BALA184
CASP51
CASN119
CLYS130
CASP149
CTHR160
CALA184
DASP51
AASN119
DASN119
DLYS130
DASP149
DTHR160
DALA184
ALYS130
AASP149
ATHR160
AALA184
BASP51
BASN119
BLYS130

223166

PDB entries from 2024-07-31

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