1YSL
Crystal structure of HMG-CoA synthase from Enterococcus faecalis with AcetoAcetyl-CoA ligand.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004421 | molecular_function | hydroxymethylglutaryl-CoA synthase activity |
A | 0006084 | biological_process | acetyl-CoA metabolic process |
A | 0008299 | biological_process | isoprenoid biosynthetic process |
A | 0010142 | biological_process | farnesyl diphosphate biosynthetic process, mevalonate pathway |
A | 0016746 | molecular_function | acyltransferase activity |
B | 0004421 | molecular_function | hydroxymethylglutaryl-CoA synthase activity |
B | 0006084 | biological_process | acetyl-CoA metabolic process |
B | 0008299 | biological_process | isoprenoid biosynthetic process |
B | 0010142 | biological_process | farnesyl diphosphate biosynthetic process, mevalonate pathway |
B | 0016746 | molecular_function | acyltransferase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 602 |
Chain | Residue |
A | LYS7 |
A | THR64 |
A | ARG167 |
site_id | AC2 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE GOL A 604 |
Chain | Residue |
A | HOH720 |
B | TYR183 |
B | PRO188 |
A | ASP83 |
A | THR377 |
A | VAL378 |
A | ARG379 |
A | HOH650 |
A | HOH654 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 B 603 |
Chain | Residue |
B | LYS7 |
B | THR64 |
B | ARG167 |
B | HOH707 |
B | HOH772 |
B | HOH818 |
site_id | AC4 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE COA B 601 |
Chain | Residue |
A | ALA254 |
B | ASP29 |
B | GLY31 |
B | LYS32 |
B | GLY36 |
B | TYR143 |
B | GLY148 |
B | GLY149 |
B | THR152 |
B | VAL196 |
B | SER201 |
B | ASN202 |
B | PRO235 |
B | TYR236 |
B | MET239 |
B | LYS242 |
B | AAE611 |
B | HOH778 |
B | HOH829 |
B | HOH858 |
site_id | AC5 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE AAE B 611 |
Chain | Residue |
B | CYS111 |
B | TYR143 |
B | PHE185 |
B | HIS233 |
B | ASN275 |
B | TYR277 |
B | SER308 |
B | COA601 |
B | HOH814 |
B | HOH858 |
site_id | AC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 605 |
Chain | Residue |
A | TYR183 |
A | PRO188 |
B | ILE82 |
B | ASP83 |
B | THR377 |
B | ARG379 |
B | HOH651 |
B | HOH855 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor/acceptor => ECO:0000250 |
Chain | Residue | Details |
B | GLU79 | |
B | HIS233 |
site_id | SWS_FT_FI2 |
Number of Residues | 1 |
Details | ACT_SITE: Acyl-thioester intermediate => ECO:0000269|PubMed:16245942 |
Chain | Residue | Details |
B | CSD111 |
site_id | SWS_FT_FI3 |
Number of Residues | 3 |
Details | BINDING: BINDING => ECO:0000250 |
Chain | Residue | Details |
B | ASP29 | |
B | SER201 | |
B | ASN275 |