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1YQR

Catalytically inactive human 8-oxoguanine glycosylase crosslinked to oxoG containing DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000978molecular_functionRNA polymerase II cis-regulatory region sequence-specific DNA binding
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003824molecular_functioncatalytic activity
A0004519molecular_functionendonuclease activity
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005829cellular_componentcytosol
A0006281biological_processDNA repair
A0006284biological_processbase-excision repair
A0006285biological_processbase-excision repair, AP site formation
A0006289biological_processnucleotide-excision repair
A0006355biological_processregulation of DNA-templated transcription
A0006974biological_processDNA damage response
A0006979biological_processresponse to oxidative stress
A0008017molecular_functionmicrotubule binding
A0008534molecular_functionoxidized purine nucleobase lesion DNA N-glycosylase activity
A0009314biological_processresponse to radiation
A0016363cellular_componentnuclear matrix
A0016607cellular_componentnuclear speck
A0016787molecular_functionhydrolase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016829molecular_functionlyase activity
A0019899molecular_functionenzyme binding
A0032357molecular_functionoxidized purine DNA binding
A0032991cellular_componentprotein-containing complex
A0034039molecular_function8-oxo-7,8-dihydroguanine DNA N-glycosylase activity
A0034614biological_processcellular response to reactive oxygen species
A0044029biological_processpositive regulation of gene expression via chromosomal CpG island demethylation
A0045007biological_processdepurination
A0045008biological_processdepyrimidination
A0045944biological_processpositive regulation of transcription by RNA polymerase II
A0140078molecular_functionclass I DNA-(apurinic or apyrimidinic site) endonuclease activity
A1901291biological_processnegative regulation of double-strand break repair via single-strand annealing
Functional Information from PDB Data
site_idAC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CA C 201
ChainResidue
CDG24

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 328
ChainResidue
ACYS241
AILE242
ALEU243
AVAL246
CDC26

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Schiff-base intermediate with DNA","evidences":[{"source":"PubMed","id":"9197244","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10706276","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11902834","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12578369","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"12592398","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15610848","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 185
ChainResidueDetails

238582

PDB entries from 2025-07-09

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