1YP2

Crystal structure of potato tuber ADP-glucose pyrophosphorylase

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005978	biological_process	glycogen biosynthetic process
A	0008878	molecular_function	glucose-1-phosphate adenylyltransferase activity
A	0009058	biological_process	biosynthetic process
B	0005978	biological_process	glycogen biosynthetic process
B	0008878	molecular_function	glucose-1-phosphate adenylyltransferase activity
B	0009058	biological_process	biosynthetic process
C	0005978	biological_process	glycogen biosynthetic process
C	0008878	molecular_function	glucose-1-phosphate adenylyltransferase activity
C	0009058	biological_process	biosynthetic process
D	0005978	biological_process	glycogen biosynthetic process
D	0008878	molecular_function	glucose-1-phosphate adenylyltransferase activity
D	0009058	biological_process	biosynthetic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE SO4 A 2000

Chain	Residue
A	ARG41
A	PRO47
A	ARG53
A	ASP370
A	LYS404
A	LYS441
A	HOH3265

---

site_id	AC2
Number of Residues	9
Details	BINDING SITE FOR RESIDUE SO4 B 2001

Chain	Residue
B	ARG53
B	SER80
B	ASP370
B	LYS404
B	LYS441
B	HOH3277
B	HOH3352
B	ARG41
B	PRO47

---

site_id	AC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE SO4 C 2002

Chain	Residue
C	ARG41
C	PRO47
C	ARG53
C	SER80
C	ASP370
C	LYS404
C	LYS441
C	HOH3309
C	HOH3370

---

site_id	AC4
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 D 2003

Chain	Residue
D	ARG41
D	PRO47
D	ARG53
D	SER80
D	ASP370
D	LYS404
D	LYS441
D	HOH3261

---

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 D 2004

Chain	Residue
A	ARG83
D	LYS69
D	HIS134
D	THR135
D	HOH3308
D	HOH3461

---

site_id	AC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE SO4 C 2005

Chain	Residue
B	ARG83
C	LYS69
C	HIS134
C	THR135
C	HOH3266

---

site_id	AC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 B 2006

Chain	Residue
B	LYS69
B	HIS134
B	THR135
B	HOH3297
B	HOH3471
C	ARG83

---

site_id	AC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 A 2007

Chain	Residue
A	LYS69
A	HIS134
A	THR135
A	HOH3249
A	HOH3380
D	ARG83

---

site_id	AC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 A 2008

Chain	Residue
A	ARG53
A	HIS84
A	GLN314
A	ARG316
A	HOH3301
A	HOH3386

---

site_id	BC1
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 B 2009

Chain	Residue
B	ARG53
B	HIS84
B	GLN314
B	ARG316
B	HOH3279
B	HOH3290
B	HOH3327
B	HOH3451

---

site_id	BC2
Number of Residues	8
Details	BINDING SITE FOR RESIDUE SO4 C 2010

Chain	Residue
C	ARG53
C	HIS84
C	GLN314
C	ARG316
C	HOH3252
C	HOH3256
C	HOH3295
C	HOH3473

---

site_id	BC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE SO4 D 2011

Chain	Residue
D	ARG53
D	HIS84
D	GLN314
D	ARG316
D	HOH3259
D	HOH3265
D	HOH3319

---

site_id	BC4
Number of Residues	10
Details	BINDING SITE FOR RESIDUE PMB A 3226

Chain	Residue
A	LYS322
A	LEU324
A	VAL338
A	ILE339
A	LYS340
A	CYS354
A	ILE355
A	HOH3462
B	LYS297
B	PRO298

---

site_id	BC5
Number of Residues	8
Details	BINDING SITE FOR RESIDUE PMB B 3227

Chain	Residue
B	LYS340
B	CYS354
B	HOH3362
B	HOH3403
A	LYS297
A	PRO298
B	LYS322
B	VAL338

---

site_id	BC6
Number of Residues	12
Details	BINDING SITE FOR RESIDUE PMB C 3228

Chain	Residue
C	LYS322
C	VAL338
C	ILE339
C	LYS340
C	CYS354
C	ILE355
C	ARG378
C	HOH3249
C	HOH3310
C	HOH3386
C	HOH3428
D	PRO298

---

site_id	BC7
Number of Residues	11
Details	BINDING SITE FOR RESIDUE PMB D 3229

Chain	Residue
C	LYS297
C	PRO298
D	LYS322
D	LEU324
D	VAL338
D	ILE339
D	LYS340
D	CYS354
D	ARG378
D	HOH3234
D	HOH3423

---

Functional Information from PROSITE/UniProt

site_id	PS00808
Number of Residues	20
Details	ADP_GLC_PYROPHOSPH_1 ADP-glucose pyrophosphorylase signature 1. GGGaGTrLypLTkkrAkPAV

Chain	Residue	Details
A	GLY27-VAL46

---

site_id	PS00809
Number of Residues	9
Details	ADP_GLC_PYROPHOSPH_2 ADP-glucose pyrophosphorylase signature 2. WFqGTADAV

Chain	Residue	Details
A	TRP116-VAL124

---

site_id	PS00810
Number of Residues	11
Details	ADP_GLC_PYROPHOSPH_3 ADP-glucose pyrophosphorylase signature 3. ASMGIYVIskD

Chain	Residue	Details
A	ALA228-ASP238

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	40
Details	Region: {"description":"Allosteric regulation","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

Catalytic Information from CSA

site_id	CSA1
Number of Residues	1
Details	Annotated By Reference To The Literature 1hv9

Chain	Residue	Details
A	ARG33

---

site_id	CSA2
Number of Residues	1
Details	Annotated By Reference To The Literature 1hv9

Chain	Residue	Details
B	ARG33

---

site_id	CSA3
Number of Residues	1
Details	Annotated By Reference To The Literature 1hv9

Chain	Residue	Details
C	ARG33

---

site_id	CSA4
Number of Residues	1
Details	Annotated By Reference To The Literature 1hv9

Chain	Residue	Details
D	ARG33

---