1YI7
Beta-d-xylosidase (selenomethionine) XYND from Clostridium Acetobutylicum
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA A 3001 |
| Chain | Residue |
| A | ASN333 |
| A | GLY362 |
| A | ASP528 |
| A | HOH3171 |
| A | HOH3235 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA B 3002 |
| Chain | Residue |
| B | HOH3358 |
| B | ASN333 |
| B | GLY362 |
| B | ASP528 |
| B | HOH3162 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA C 3003 |
| Chain | Residue |
| C | ASN333 |
| C | GLY362 |
| C | ASP528 |
| C | HOH3133 |
| C | HOH3201 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CA D 3004 |
| Chain | Residue |
| D | ASN333 |
| D | GLY362 |
| D | ASP528 |
| D | HOH3218 |
| D | HOH3273 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 A 3005 |
| Chain | Residue |
| A | LYS326 |
| A | THR327 |
| A | TYR328 |
| A | HOH3206 |
| A | HOH3281 |
| A | HOH3326 |
| A | HOH3389 |
| A | HOH3460 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 B 3006 |
| Chain | Residue |
| B | LYS326 |
| B | THR327 |
| B | TYR328 |
| B | HOH3236 |
| B | HOH3265 |
| B | HOH3356 |
| B | HOH3384 |
| site_id | AC7 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 C 3007 |
| Chain | Residue |
| C | LYS326 |
| C | THR327 |
| C | TYR328 |
| C | HOH3213 |
| C | HOH3270 |
| C | HOH3298 |
| C | HOH3301 |
| C | HOH3325 |
| site_id | AC8 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE SO4 D 3008 |
| Chain | Residue |
| D | LYS326 |
| D | THR327 |
| D | TYR328 |
| D | HOH3153 |
| D | HOH3189 |
| D | HOH3230 |
| D | HOH3349 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 B 3009 |
| Chain | Residue |
| B | SER311 |
| B | VAL312 |
| B | ASN313 |
| B | HOH3323 |
| B | HOH3548 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 D 3010 |
| Chain | Residue |
| D | SER311 |
| D | VAL312 |
| D | ASN313 |
| site_id | BC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 3011 |
| Chain | Residue |
| A | SER2 |
| A | LEU3 |
| A | LYS5 |
| A | HOH3513 |
| B | LYS44 |
| site_id | BC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EPE A 3012 |
| Chain | Residue |
| A | ASP401 |
| A | HOH3192 |
| A | HOH3259 |
| A | HOH3315 |
| A | HOH3500 |
| B | TYR156 |
| B | LYS173 |
| B | ALA174 |
| B | HOH3081 |
| site_id | BC4 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE EPE A 3013 |
| Chain | Residue |
| A | TYR156 |
| A | LYS173 |
| A | ALA174 |
| A | HOH3034 |
| A | HOH3179 |
| A | HOH3448 |
| A | HOH3538 |
| A | HOH3542 |
| B | ASP401 |
| B | THR402 |
| site_id | BC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EPE D 3014 |
| Chain | Residue |
| C | ASP401 |
| C | HOH3165 |
| D | TYR156 |
| D | LYS173 |
| D | ALA174 |
| D | HOH3106 |
| D | HOH3447 |
| D | HOH3538 |
| D | HOH3664 |
| site_id | BC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EPE C 3015 |
| Chain | Residue |
| C | LYS173 |
| C | ALA174 |
| C | HOH3088 |
| C | HOH3215 |
| C | HOH3413 |
| D | ASP401 |
| site_id | BC7 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL A 3016 |
| Chain | Residue |
| A | LEU62 |
| A | ASP63 |
| A | ASP91 |
| A | TYR105 |
| A | PRO119 |
| A | HOH3193 |
| A | HOH3217 |
| A | HOH3241 |
| A | SER60 |
| A | LEU61 |
| site_id | BC8 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE GOL B 3017 |
| Chain | Residue |
| B | SER60 |
| B | LEU61 |
| B | LEU62 |
| B | ASP63 |
| B | ASP91 |
| B | PRO119 |
| B | HOH3088 |
| B | HOH3187 |
| B | HOH3342 |
| site_id | BC9 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE GOL C 3018 |
| Chain | Residue |
| C | SER60 |
| C | LEU61 |
| C | LEU62 |
| C | ASP63 |
| C | ASP91 |
| C | TYR105 |
| C | PRO119 |
| C | HOH3050 |
| C | HOH3290 |
| C | HOH3302 |
| C | HOH3395 |
| site_id | CC1 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL D 3019 |
| Chain | Residue |
| D | SER60 |
| D | LEU61 |
| D | LEU62 |
| D | ASP63 |
| D | ASP91 |
| D | TYR105 |
| D | PRO119 |
| D | HOH3110 |
| D | HOH3208 |
| D | HOH3284 |
| site_id | CC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 3020 |
| Chain | Residue |
| A | ASP15 |
| A | PHE32 |
| A | TRP74 |
| A | ALA75 |
| A | ASP128 |
| A | ARG288 |
| A | GOL3024 |
| A | HOH3060 |
| site_id | CC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 3021 |
| Chain | Residue |
| B | ASP15 |
| B | PHE32 |
| B | TRP74 |
| B | ALA75 |
| B | ASP128 |
| B | ARG288 |
| B | GOL3025 |
| B | HOH3102 |
| site_id | CC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL C 3022 |
| Chain | Residue |
| C | ASP15 |
| C | PHE32 |
| C | TRP74 |
| C | ALA75 |
| C | ASP128 |
| C | ARG288 |
| C | GOL3026 |
| C | HOH3054 |
| site_id | CC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL D 3023 |
| Chain | Residue |
| D | ASP15 |
| D | PHE32 |
| D | TRP74 |
| D | ALA75 |
| D | ASP128 |
| D | ARG288 |
| D | GOL3027 |
| D | HOH3083 |
| site_id | CC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL A 3024 |
| Chain | Residue |
| A | GLU187 |
| A | GLY206 |
| A | THR207 |
| A | GOL3020 |
| A | HOH3366 |
| site_id | CC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 3025 |
| Chain | Residue |
| B | GLU187 |
| B | THR207 |
| B | PHE506 |
| B | GOL3021 |
| B | HOH3223 |
| B | HOH3367 |
| site_id | CC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 3026 |
| Chain | Residue |
| C | GLU187 |
| C | GLY206 |
| C | THR207 |
| C | PHE506 |
| C | GOL3022 |
| C | HOH3267 |
| site_id | CC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL D 3027 |
| Chain | Residue |
| D | GLU187 |
| D | GLY206 |
| D | THR207 |
| D | GOL3023 |
| D | HOH3261 |
| site_id | DC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 3028 |
| Chain | Residue |
| A | PRO240 |
| A | ARG241 |
| A | HOH3272 |
| A | HOH3390 |
| A | HOH3394 |
| C | ILE183 |
| site_id | DC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 3029 |
| Chain | Residue |
| B | PRO240 |
| B | ARG241 |
| B | HOH3222 |
| D | PRO232 |
| D | HOH3307 |
| D | HOH3435 |
| site_id | DC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE GOL C 3030 |
| Chain | Residue |
| A | ILE183 |
| A | THR235 |
| C | PRO240 |
| C | ARG241 |
| C | HOH3241 |
| C | HOH3269 |
| C | HOH3416 |
| site_id | DC4 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL D 3031 |
| Chain | Residue |
| B | ILE183 |
| B | TRP237 |
| B | HOH3347 |
| D | PRO240 |
| D | ARG241 |
| D | HOH3248 |
| D | HOH3334 |
| D | HOH3629 |
| site_id | DC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL A 3032 |
| Chain | Residue |
| A | GLN280 |
| A | ARG281 |
| A | GLY282 |
| A | TYR283 |
| A | HOH3345 |
| A | HOH3453 |
| site_id | DC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 3033 |
| Chain | Residue |
| B | GLN280 |
| B | ARG281 |
| B | GLY282 |
| B | TYR283 |
| B | HOH3233 |
| site_id | DC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL C 3034 |
| Chain | Residue |
| C | GLN280 |
| C | ARG281 |
| C | GLY282 |
| C | TYR283 |
| C | HOH3324 |
| site_id | DC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL D 3035 |
| Chain | Residue |
| D | GLN280 |
| D | ARG281 |
| D | GLY282 |
| D | TYR283 |
| D | HOH3297 |
