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1YHU

Crystal structure of Riftia pachyptila C1 hemoglobin reveals novel assembly of 24 subunits.

Functional Information from GO Data
ChainGOidnamespacecontents
A0005344molecular_functionoxygen carrier activity
A0005506molecular_functioniron ion binding
A0005576cellular_componentextracellular region
A0005833cellular_componenthemoglobin complex
A0015671biological_processoxygen transport
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
B0001666biological_processresponse to hypoxia
B0005344molecular_functionoxygen carrier activity
B0005506molecular_functioniron ion binding
B0005576cellular_componentextracellular region
B0005833cellular_componenthemoglobin complex
B0015671biological_processoxygen transport
B0019825molecular_functionoxygen binding
B0020037molecular_functionheme binding
B0046872molecular_functionmetal ion binding
C0001666biological_processresponse to hypoxia
C0005344molecular_functionoxygen carrier activity
C0005506molecular_functioniron ion binding
C0005576cellular_componentextracellular region
C0005833cellular_componenthemoglobin complex
C0015671biological_processoxygen transport
C0019825molecular_functionoxygen binding
C0020037molecular_functionheme binding
C0046872molecular_functionmetal ion binding
D0005344molecular_functionoxygen carrier activity
D0005506molecular_functioniron ion binding
D0005576cellular_componentextracellular region
D0005833cellular_componenthemoglobin complex
D0015671biological_processoxygen transport
D0019825molecular_functionoxygen binding
D0020037molecular_functionheme binding
D0046872molecular_functionmetal ion binding
E0005344molecular_functionoxygen carrier activity
E0005506molecular_functioniron ion binding
E0005576cellular_componentextracellular region
E0005833cellular_componenthemoglobin complex
E0015671biological_processoxygen transport
E0019825molecular_functionoxygen binding
E0020037molecular_functionheme binding
E0046872molecular_functionmetal ion binding
F0001666biological_processresponse to hypoxia
F0005344molecular_functionoxygen carrier activity
F0005506molecular_functioniron ion binding
F0005576cellular_componentextracellular region
F0005833cellular_componenthemoglobin complex
F0015671biological_processoxygen transport
F0019825molecular_functionoxygen binding
F0020037molecular_functionheme binding
F0046872molecular_functionmetal ion binding
G0001666biological_processresponse to hypoxia
G0005344molecular_functionoxygen carrier activity
G0005506molecular_functioniron ion binding
G0005576cellular_componentextracellular region
G0005833cellular_componenthemoglobin complex
G0015671biological_processoxygen transport
G0019825molecular_functionoxygen binding
G0020037molecular_functionheme binding
G0046872molecular_functionmetal ion binding
H0005344molecular_functionoxygen carrier activity
H0005506molecular_functioniron ion binding
H0005576cellular_componentextracellular region
H0005833cellular_componenthemoglobin complex
H0015671biological_processoxygen transport
H0019825molecular_functionoxygen binding
H0020037molecular_functionheme binding
H0046872molecular_functionmetal ion binding
I0005344molecular_functionoxygen carrier activity
I0005506molecular_functioniron ion binding
I0005576cellular_componentextracellular region
I0005833cellular_componenthemoglobin complex
I0015671biological_processoxygen transport
I0019825molecular_functionoxygen binding
I0020037molecular_functionheme binding
I0046872molecular_functionmetal ion binding
J0001666biological_processresponse to hypoxia
J0005344molecular_functionoxygen carrier activity
J0005506molecular_functioniron ion binding
J0005576cellular_componentextracellular region
J0005833cellular_componenthemoglobin complex
J0015671biological_processoxygen transport
J0019825molecular_functionoxygen binding
J0020037molecular_functionheme binding
J0046872molecular_functionmetal ion binding
K0001666biological_processresponse to hypoxia
K0005344molecular_functionoxygen carrier activity
K0005506molecular_functioniron ion binding
K0005576cellular_componentextracellular region
K0005833cellular_componenthemoglobin complex
K0015671biological_processoxygen transport
K0019825molecular_functionoxygen binding
K0020037molecular_functionheme binding
K0046872molecular_functionmetal ion binding
L0005344molecular_functionoxygen carrier activity
L0005506molecular_functioniron ion binding
L0005576cellular_componentextracellular region
L0005833cellular_componenthemoglobin complex
L0015671biological_processoxygen transport
L0019825molecular_functionoxygen binding
L0020037molecular_functionheme binding
L0046872molecular_functionmetal ion binding
M0005344molecular_functionoxygen carrier activity
M0005506molecular_functioniron ion binding
M0005576cellular_componentextracellular region
M0005833cellular_componenthemoglobin complex
M0015671biological_processoxygen transport
M0019825molecular_functionoxygen binding
M0020037molecular_functionheme binding
M0046872molecular_functionmetal ion binding
N0001666biological_processresponse to hypoxia
N0005344molecular_functionoxygen carrier activity
N0005506molecular_functioniron ion binding
N0005576cellular_componentextracellular region
N0005833cellular_componenthemoglobin complex
N0015671biological_processoxygen transport
N0019825molecular_functionoxygen binding
N0020037molecular_functionheme binding
N0046872molecular_functionmetal ion binding
O0001666biological_processresponse to hypoxia
O0005344molecular_functionoxygen carrier activity
O0005506molecular_functioniron ion binding
O0005576cellular_componentextracellular region
O0005833cellular_componenthemoglobin complex
O0015671biological_processoxygen transport
O0019825molecular_functionoxygen binding
O0020037molecular_functionheme binding
O0046872molecular_functionmetal ion binding
P0005344molecular_functionoxygen carrier activity
P0005506molecular_functioniron ion binding
P0005576cellular_componentextracellular region
P0005833cellular_componenthemoglobin complex
P0015671biological_processoxygen transport
P0019825molecular_functionoxygen binding
P0020037molecular_functionheme binding
P0046872molecular_functionmetal ion binding
Q0005344molecular_functionoxygen carrier activity
Q0005506molecular_functioniron ion binding
Q0005576cellular_componentextracellular region
Q0005833cellular_componenthemoglobin complex
Q0015671biological_processoxygen transport
Q0019825molecular_functionoxygen binding
Q0020037molecular_functionheme binding
Q0046872molecular_functionmetal ion binding
R0001666biological_processresponse to hypoxia
R0005344molecular_functionoxygen carrier activity
R0005506molecular_functioniron ion binding
R0005576cellular_componentextracellular region
R0005833cellular_componenthemoglobin complex
R0015671biological_processoxygen transport
R0019825molecular_functionoxygen binding
R0020037molecular_functionheme binding
R0046872molecular_functionmetal ion binding
S0001666biological_processresponse to hypoxia
S0005344molecular_functionoxygen carrier activity
S0005506molecular_functioniron ion binding
S0005576cellular_componentextracellular region
S0005833cellular_componenthemoglobin complex
S0015671biological_processoxygen transport
S0019825molecular_functionoxygen binding
S0020037molecular_functionheme binding
S0046872molecular_functionmetal ion binding
T0005344molecular_functionoxygen carrier activity
T0005506molecular_functioniron ion binding
T0005576cellular_componentextracellular region
T0005833cellular_componenthemoglobin complex
T0015671biological_processoxygen transport
T0019825molecular_functionoxygen binding
T0020037molecular_functionheme binding
T0046872molecular_functionmetal ion binding
U0005344molecular_functionoxygen carrier activity
U0005506molecular_functioniron ion binding
U0005576cellular_componentextracellular region
U0005833cellular_componenthemoglobin complex
U0015671biological_processoxygen transport
U0019825molecular_functionoxygen binding
U0020037molecular_functionheme binding
U0046872molecular_functionmetal ion binding
V0001666biological_processresponse to hypoxia
V0005344molecular_functionoxygen carrier activity
V0005506molecular_functioniron ion binding
V0005576cellular_componentextracellular region
V0005833cellular_componenthemoglobin complex
V0015671biological_processoxygen transport
V0019825molecular_functionoxygen binding
V0020037molecular_functionheme binding
V0046872molecular_functionmetal ion binding
W0001666biological_processresponse to hypoxia
W0005344molecular_functionoxygen carrier activity
W0005506molecular_functioniron ion binding
W0005576cellular_componentextracellular region
W0005833cellular_componenthemoglobin complex
W0015671biological_processoxygen transport
W0019825molecular_functionoxygen binding
W0020037molecular_functionheme binding
W0046872molecular_functionmetal ion binding
X0005344molecular_functionoxygen carrier activity
X0005506molecular_functioniron ion binding
X0005576cellular_componentextracellular region
X0005833cellular_componenthemoglobin complex
X0015671biological_processoxygen transport
X0019825molecular_functionoxygen binding
X0020037molecular_functionheme binding
X0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 190
ChainResidue
BHIS31
BHIS57
JGLU118

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN B 191
ChainResidue
BHIS36
BHIS40
BHIS111

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN F 190
ChainResidue
BGLU118
FHIS31
FHIS57

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN F 191
ChainResidue
FHIS36
FHIS40
FHIS111

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN J 190
ChainResidue
FGLU118
JHIS31
JHIS57

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN J 191
ChainResidue
JHIS36
JHIS40
JHIS111

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN N 190
ChainResidue
NHIS31
NHIS57
VGLU118

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN N 191
ChainResidue
NHIS36
NHIS40
NHIS111

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN R 190
ChainResidue
NGLU118
RHIS31
RHIS57

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN R 191
ChainResidue
RHIS36
RHIS40
RHIS111

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN V 190
ChainResidue
RGLU118
VHIS31
VHIS57

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ZN V 191
ChainResidue
VHIS36
VHIS40
VHIS111

site_idBC4
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM A 160
ChainResidue
APHE48
ASER50
AVAL51
AARG67
ALEU72
AGLN95
AHIS96
AARG99
AILE101
AASN105
APHE106
APHE109
AILE141
AOXY161
CHIS94
CGLN98

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY A 161
ChainResidue
ATRP34
APHE48
AHIS64
AVAL68
AHEM160

site_idBC6
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM B 160
ChainResidue
BMET47
BPHE48
BARG50
BHIS64
BLEU72
BGLN95
BHIS96
BARG99
BVAL101
BHIS105
BVAL109
BTHR139
BOXY161
DHIS93
DGLN97

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY B 161
ChainResidue
BTRP34
BPHE48
BHIS64
BVAL68
BHEM160

site_idBC8
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM C 160
ChainResidue
AHIS91
AGLN95
CLEU50
CPHE51
CARG53
CVAL54
CARG70
CGLN98
CHIS99
CGLY109
CPHE110
CMET113
COXY161

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY C 161
ChainResidue
CPHE37
CPHE51
CHIS67
CVAL71
CHEM160

site_idCC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM D 160
ChainResidue
DALA52
DVAL53
DARG69
DVAL70
DLEU74
DGLN97
DHIS98
DARG101
DGLY108
DPHE109
DILE112
DMET143
DOXY161
BHIS91
BGLN95
DLEU49
DPHE50

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY D 161
ChainResidue
DPHE36
DPHE50
DHIS66
DVAL70
DHEM160

site_idCC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM E 160
ChainResidue
EPHE48
ESER50
EVAL51
EARG67
EGLN95
EHIS96
EARG99
EILE101
EASN105
EPHE106
EPHE109
EILE141
EOXY161
GHIS94
GGLN98

site_idCC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OXY E 161
ChainResidue
ETRP34
EPHE48
EHIS64
EHEM160

site_idCC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM F 160
ChainResidue
FMET47
FPHE48
FARG50
FLEU72
FGLN95
FHIS96
FARG99
FVAL101
FHIS105
FTYR106
FVAL109
FOXY161
HHIS93
HGLN97

site_idCC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY F 161
ChainResidue
FTRP34
FPHE48
FHIS64
FVAL68
FHEM160

site_idCC7
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM G 160
ChainResidue
EHIS91
EGLN95
GLEU50
GPHE51
GARG53
GVAL54
GARG70
GGLN98
GHIS99
GGLY109
GPHE110
GMET113
GOXY161

site_idCC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY G 161
ChainResidue
GPHE37
GPHE51
GHIS67
GVAL71
GHEM160

site_idCC9
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM H 160
ChainResidue
FHIS91
FGLN95
HLEU49
HPHE50
HALA52
HVAL53
HARG69
HLEU74
HGLN97
HHIS98
HARG101
HGLY108
HPHE109
HILE112
HMET143
HOXY161

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY H 161
ChainResidue
HPHE36
HPHE50
HHIS66
HVAL70
HHEM160

site_idDC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM I 160
ChainResidue
HLYS54
IPHE48
ISER50
IVAL51
IARG67
IGLN95
IHIS96
IARG99
IILE101
IASN105
IPHE106
IPHE109
IILE141
IOXY161
KHIS94
KGLN98

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OXY I 161
ChainResidue
ITRP34
IPHE48
IHIS64
IHEM160

site_idDC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM J 160
ChainResidue
JMET47
JPHE48
JARG50
JGLN95
JHIS96
JARG99
JVAL101
JHIS105
JTYR106
JVAL109
JOXY161
LHIS93
LGLN97

site_idDC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY J 161
ChainResidue
JTRP34
JPHE48
JHIS64
JVAL68
JHEM160

site_idDC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM K 160
ChainResidue
IHIS91
IGLN95
KLEU50
KPHE51
KARG53
KVAL54
KARG70
KGLN98
KHIS99
KGLY109
KPHE110
KMET113
KOXY161

site_idDC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY K 161
ChainResidue
KPHE37
KPHE51
KHIS67
KVAL71
KHEM160

site_idDC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM L 160
ChainResidue
JHIS91
JGLN95
LLEU49
LPHE50
LALA52
LVAL53
LARG69
LLEU74
LGLN97
LHIS98
LARG101
LGLY108
LPHE109
LILE112
LMET143
LOXY161

site_idDC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY L 161
ChainResidue
LPHE36
LPHE50
LHIS66
LVAL70
LHEM160

site_idEC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM M 160
ChainResidue
MPHE48
MSER50
MVAL51
MARG67
MLEU72
MGLN95
MHIS96
MARG99
MILE101
MASN105
MPHE106
MPHE109
MILE141
MOXY161
OHIS94
OGLN98

site_idEC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OXY M 161
ChainResidue
MTRP34
MPHE48
MHIS64
MHEM160

site_idEC3
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM N 160
ChainResidue
NMET47
NPHE48
NARG50
NVAL51
NLEU72
NGLN95
NHIS96
NARG99
NVAL101
NHIS105
NTYR106
NVAL109
NOXY161
PHIS93
PGLN97

site_idEC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY N 161
ChainResidue
NTRP34
NPHE48
NHIS64
NVAL68
NHEM160

site_idEC5
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM O 160
ChainResidue
MHIS91
MGLN95
OLEU50
OPHE51
OARG53
OVAL54
OARG70
OGLN98
OHIS99
OARG102
OGLY109
OPHE110
OMET113
OOXY161

site_idEC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY O 161
ChainResidue
OPHE37
OPHE51
OHIS67
OVAL71
OHEM160

site_idEC7
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM P 160
ChainResidue
NHIS91
NGLN95
PLEU49
PPHE50
PALA52
PVAL53
PARG69
PLEU74
PGLN97
PHIS98
PARG101
PGLY108
PPHE109
PILE112
PMET143
POXY161

site_idEC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY P 161
ChainResidue
PPHE36
PPHE50
PHIS66
PVAL70
PHEM160

site_idEC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM Q 160
ChainResidue
QPHE48
QSER50
QVAL51
QARG67
QGLN95
QHIS96
QARG99
QILE101
QASN105
QPHE106
QPHE109
QILE141
QOXY161
SHIS94
SGLN98

site_idFC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OXY Q 161
ChainResidue
QTRP34
QPHE48
QHIS64
QHEM160

site_idFC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM R 160
ChainResidue
RMET47
RPHE48
RARG50
RVAL51
RHIS64
RGLN95
RHIS96
RARG99
RVAL101
RHIS105
RTYR106
RVAL109
ROXY161
THIS93
TGLN97

site_idFC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY R 161
ChainResidue
RTRP34
RPHE48
RHIS64
RVAL68
RHEM160

site_idFC4
Number of Residues13
DetailsBINDING SITE FOR RESIDUE HEM S 160
ChainResidue
QHIS91
QGLN95
SLEU50
SPHE51
SARG53
SVAL54
SARG70
SGLN98
SHIS99
SGLY109
SPHE110
SMET113
SOXY161

site_idFC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY S 161
ChainResidue
SPHE37
SPHE51
SHIS67
SVAL71
SHEM160

site_idFC6
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM T 160
ChainResidue
RHIS91
RGLN95
TLEU49
TPHE50
TALA52
TVAL53
TARG69
TLEU74
TGLN97
THIS98
TARG101
TGLY108
TPHE109
TILE112
TMET143
TOXY161

site_idFC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY T 161
ChainResidue
TPHE36
TPHE50
THIS66
TVAL70
THEM160

site_idFC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEM U 160
ChainResidue
UPHE48
USER50
UVAL51
UARG67
ULEU72
UGLN95
UHIS96
UARG99
UILE101
UASN105
UPHE106
UPHE109
UILE141
UOXY161
WHIS94
WGLN98

site_idFC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE OXY U 161
ChainResidue
UTRP34
UPHE48
UHIS64
UHEM160

site_idGC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE HEM V 160
ChainResidue
VMET47
VPHE48
VARG50
VLEU72
VGLN95
VHIS96
VARG99
VVAL101
VHIS105
VTYR106
VVAL109
VTHR139
VOXY161
XHIS93
XGLN97

site_idGC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY V 161
ChainResidue
VTRP34
VPHE48
VHIS64
VVAL68
VHEM160

site_idGC3
Number of Residues14
DetailsBINDING SITE FOR RESIDUE HEM W 160
ChainResidue
UHIS91
UGLN95
WLEU50
WPHE51
WARG53
WVAL54
WARG70
WGLN98
WHIS99
WARG102
WGLY109
WPHE110
WMET113
WOXY161

site_idGC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY W 161
ChainResidue
WPHE37
WPHE51
WHIS67
WVAL71
WHEM160

site_idGC5
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEM X 160
ChainResidue
VHIS91
VGLN95
XLEU49
XPHE50
XALA52
XVAL53
XARG69
XVAL70
XLEU74
XGLN97
XHIS98
XARG101
XGLY108
XPHE109
XILE112
XMET143
XOXY161

site_idGC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE OXY X 161
ChainResidue
XPHE36
XPHE50
XHIS66
XVAL70
XHEM160

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: proximal binding residue
ChainResidueDetails
BHIS96
FHIS96
JHIS96
NHIS96
RHIS96
VHIS96

223166

PDB entries from 2024-07-31

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