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1YFR

crystal structure of alanyl-tRNA synthetase in complex with ATP and magnesium

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0004813molecular_functionalanine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0006419biological_processalanyl-tRNA aminoacylation
B0000166molecular_functionnucleotide binding
B0003676molecular_functionnucleic acid binding
B0004813molecular_functionalanine-tRNA ligase activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006419biological_processalanyl-tRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 1502
ChainResidue
AGLU174
AGLU191
AASN194
AATP1500
AMG1504
AHOH1510

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 1503
ChainResidue
AATP1500
AHOH1505
AHOH1506

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1504
ChainResidue
AGLU174
AATP1500
AMG1502
AHOH1509
AHOH1531

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 2502
ChainResidue
BGLU174
BGLU191
BASN194
BATP2500
BMG2504
BHOH2506

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 2503
ChainResidue
BARG69
BATP2500
BHOH2505

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 2504
ChainResidue
BGLU174
BGLU191
BLYS354
BATP2500
BMG2502

site_idAC7
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ATP A 1500
ChainResidue
AARG85
AHIS86
AHIS87
AGLU191
AASN194
AGLY219
AGLY221
AARG224
AASN235
AMG1502
AMG1503
AMG1504
AHOH1505
AHOH1507
AHOH1531
AHOH1569
AHOH1590

site_idAC8
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ATP B 2500
ChainResidue
BARG69
BARG85
BHIS86
BHIS87
BMET92
BGLU191
BILE192
BASN194
BGLY219
BGLY221
BARG224
BMG2502
BMG2503
BMG2504
BHOH2572
BHOH2600

223532

PDB entries from 2024-08-07

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