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1XZQ

Structure of the GTP-binding protein TrmE from Thermotoga maritima complexed with 5-formyl-THF

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0002098biological_processtRNA wobble uridine modification
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006400biological_processtRNA modification
A0008033biological_processtRNA processing
A0016787molecular_functionhydrolase activity
A0030488biological_processtRNA methylation
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE FON A 451
ChainResidue
AARG20
BGLU59
BVAL61
BMET80
ALYS69
ASER70
ATYR71
AGLU78
ALYS117
ALYS450
BILE16
BHIS47

site_idAC2
Number of Residues13
DetailsBINDING SITE FOR RESIDUE FON B 118
ChainResidue
AILE16
AHIS47
AGLU59
AVAL61
AMET80
AHIS82
BARG20
BARG43
BPRO68
BLYS69
BSER70
BTYR71
BGLU78

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues161
DetailsDomain: {"description":"TrmE-type G"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00379","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"15616586","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues25
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00379","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AASP265

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AVAL269

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1ksj
ChainResidueDetails
AASN221

249697

PDB entries from 2026-02-25

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