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1XXV

Yersinia YopH (residues 163-468) binds phosphonodifluoromethyl-Phe containing hexapeptide at two sites

Functional Information from GO Data
ChainGOidnamespacecontents
A0004725molecular_functionprotein tyrosine phosphatase activity
A0006470biological_processprotein dephosphorylation
A0016311biological_processdephosphorylation
B0004725molecular_functionprotein tyrosine phosphatase activity
B0006470biological_processprotein dephosphorylation
B0016311biological_processdephosphorylation
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR CHAIN C OF EPIDERMAL GROWTH FACTOR RECEPTOR DERIVED PEPTIDE
ChainResidue
APHE229
AGLY406
AVAL407
AGLY408
AARG409
AGLN446
AHOH632
AHOH745
BHOH705
CNH2107
CHOH624
AARG230
AASP231
AILE232
AASP356
AGLN357
ACYS403
AARG404
AALA405

site_idAC2
Number of Residues14
DetailsBINDING SITE FOR CHAIN D OF EPIDERMAL GROWTH FACTOR RECEPTOR DERIVED PEPTIDE
ChainResidue
AARG278
AARG295
ALYS342
ATHR343
AMET382
ALYS386
ASER388
ASER389
AHOH774
BSER468
DNH27
DHOH539
DHOH540
DHOH542

site_idAC3
Number of Residues17
DetailsBINDING SITE FOR CHAIN E OF EPIDERMAL GROWTH FACTOR RECEPTOR DERIVED PEPTIDE
ChainResidue
AHOH749
BPHE229
BARG230
BASP231
BILE232
BASP356
BGLN357
BCYS403
BARG404
BALA405
BGLY406
BVAL407
BGLY408
BARG409
BGLN446
ENH2107
EHOH783

site_idAC4
Number of Residues15
DetailsBINDING SITE FOR CHAIN F OF EPIDERMAL GROWTH FACTOR RECEPTOR DERIVED PEPTIDE
ChainResidue
ASER468
BARG278
BARG295
BLYS342
BTHR343
BILE344
BSER345
BLYS386
BSER388
BSER389
BHOH709
FNH27
FHOH642
FHOH644
FHOH818

Functional Information from PROSITE/UniProt
site_idPS00383
Number of Residues11
DetailsTYR_PHOSPHATASE_1 Tyrosine specific protein phosphatases active site. IHCraGvgRTA
ChainResidueDetails
AILE401-ALA411

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Phosphocysteine intermediate
ChainResidueDetails
ACYS403
BCYS403

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 47
ChainResidueDetails
AGLU290steric role
ATRP354steric role
AASP356hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS402electrostatic stabiliser, hydrogen bond donor
ACYS403nucleofuge, nucleophile
AARG409electrostatic stabiliser, hydrogen bond donor
ATHR410electrostatic stabiliser, hydrogen bond donor

site_idMCSA2
Number of Residues7
DetailsM-CSA 47
ChainResidueDetails
BGLU290steric role
BTRP354steric role
BASP356hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS402electrostatic stabiliser, hydrogen bond donor
BCYS403nucleofuge, nucleophile
BARG409electrostatic stabiliser, hydrogen bond donor
BTHR410electrostatic stabiliser, hydrogen bond donor

site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1ytw
ChainResidueDetails
AASP356
ATHR410
ACYS403
AARG409
AGLU290
AHIS402

site_idCSA2
Number of Residues6
DetailsAnnotated By Reference To The Literature 1ytw
ChainResidueDetails
BASP356
BTHR410
BCYS403
BARG409
BGLU290
BHIS402

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ytw
ChainResidueDetails
AASP356
ATHR410
ACYS403
AARG409

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ytw
ChainResidueDetails
BASP356
BTHR410
BCYS403
BARG409

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PDB entries from 2024-05-01

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